Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 303 a.a., DNA-binding transcriptional activator GcvA (RefSeq) from Shewanella sp. ANA-3

 Score =  137 bits (346), Expect = 2e-37
 Identities = 97/288 (33%), Positives = 143/288 (49%), Gaps = 11/288 (3%)

Query: 6   PLTALRTFESASRLLSFKAAAQELSVTPTAVSHQIRSLETWLGVPLFERLPRQVRLTECG 65
           PL A++ FE+A+R LSF  AA+EL VT  AVSHQI++LE +LG+ LF R  R + LTE G
Sbjct: 7   PLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSLLLTEEG 66

Query: 66  ERLFHSVHGALLDVAQSLDTLRPQRSTGHLTVSTTPAFAALWLVPRLGRFYAAHPGINLR 125
           +  F  +      +A + D L  + + G LTVS +P+FA  WLVPRL +F   +P I++R
Sbjct: 67  QSYFLDIKDIFTQLADATDRLLARSAIGSLTVSMSPSFAIQWLVPRLSKFSEKNPDIDVR 126

Query: 126 LD-TQCEVVDLQQDASVDLVIRYSLDDYPNLYGLCLFDESFAVYGSPEQVVLAQTQAPTL 184
           +     E   L  D  VD+ I Y L ++P L    L +E      SP  ++         
Sbjct: 127 IKAVDTEASSLTDD--VDVAIYYGLGNWPGLRADKLRNEVLIPVCSP-MLLNGPKPLSKP 183

Query: 185 ISVRWHN--SKLYALGWQAWCEKAG--ERWLQDAPVLREYDEEHYALQAAIAGQGLVLAS 240
             +++H     +    WQAW  + G  +  +   P+   +      LQAA  GQG+ L  
Sbjct: 184 EDLKYHTLLHDMSRHDWQAWFRQCGIHDINVNQGPI---FSHSSLVLQAAAHGQGVALGY 240

Query: 241 NILVSESLASGLLVPYRPRISVDGAGYSALCVPGRERHPPVRAFFQWM 288
           ++L    + +G LV     + V    Y  +C         V AF +WM
Sbjct: 241 SVLARPDIKAGRLVCPFQEVLVSKDAYYLVCQQNHAELGKVVAFREWM 288