Pairwise Alignments

Query, 248 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (262), Expect = 9e-28
 Identities = 73/225 (32%), Positives = 120/225 (53%), Gaps = 15/225 (6%)

Query: 4   LIVDDEPQARERLSRLVSDLEGYAVLEPSATTGEEALTLIDSLKPDVVLLDIRMPGLDGL 63
           ++ DDEP  R  L++L+++L     +  SA  G+ AL  I+  +PDVV LDIRMP +DG+
Sbjct: 9   VLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDGI 68

Query: 64  QVAARLSERESPPALVFCAAGDEFSAETLEASGVSFLTKPVAGEALLKALKKAERPTRVQ 123
           +VA RL ++   P +VF  A DE++    E   + +L KP++   L    +K ++  R  
Sbjct: 69  EVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRRN 128

Query: 124 LAA---LTQPAAQSGN-----GPRSHISARTRKG--IELIPLGEVVYFIADHKYVTLRHQ 173
           +A    L Q  +Q         P+  +  +  KG  I LI + E++Y  A+ KY++L   
Sbjct: 129 VAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLYKV 188

Query: 174 GG----EVLLDEPLKALEDEFG-DRFVRIHRNALVARERIERLQR 213
            G    E LL   LK L  +   ++F +IHR+ +V   +I+++ R
Sbjct: 189 HGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTR 233