Pairwise Alignments

Query, 190 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 150 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 50.1 bits (118), Expect = 2e-11
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 7/90 (7%)

Query: 88  LSGFVAVAAVAFFAMWSVLSNLLCAILIFTVGPFRLGDIVELVDTVDKPGVKGRVVAINL 147
           +S   AV  VA  A WS+LSNL   +LIF V P+R+G+ + +VD  +   + G ++ I  
Sbjct: 43  VSSAFAVMGVALVAQWSILSNLTAGVLIFFVFPYRIGERIRVVDKDE--DICGVIIEI-A 99

Query: 148 LYTTLIEVAEAGTDSAMVQVPNSLFFQRSV 177
           L+  LI      T    +  PN+L  Q++V
Sbjct: 100 LFHVLIHRDNGDT----ITYPNNLMLQKAV 125