Pairwise Alignments

Query, 222 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  118 bits (295), Expect = 1e-31
 Identities = 66/217 (30%), Positives = 119/217 (54%), Gaps = 5/217 (2%)

Query: 6   DFVPVLANTDLLLRGALFTLELTAIGAILGVALGTVGAVVRAWKIQPFAWCFGVYVELIR 65
           DF  ++ +  + L G   T+ L ++  ++G+      A+ R  K + F+     Y+  +R
Sbjct: 2   DFSLIIDSLPIYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLR 61

Query: 66  NTPFLVQLFFIFFGLPS-LGLKITEWQ----AAVLAMVINLGAYSTEIIRAGIQAIPRGQ 120
            TP LVQL+ I++G+     +K T W+     A++A ++N  AY+ EIIR  I  +P+G+
Sbjct: 62  GTPLLVQLYLIYYGMDQWFPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKGE 121

Query: 121 LEAAAALAMTRFEAFRHVVLLPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFAANFI 180
           +EAA A  M+RF+ ++ ++L  AL +  PA S+++I ++ GSAV   +   +L+ AA  +
Sbjct: 122 VEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLV 181

Query: 181 QSRNFRAFETYALTTLVYLCMALMIRQLLNWIGRRFV 217
            SR +  FE +    L Y+ +  +I        +RF+
Sbjct: 182 NSRYYAPFEAFLSAGLFYMALTFIILWCFKQAEQRFL 218