Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Pseudomonas simiae WCS417

Subject, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

 Score = 68.2 bits (165), Expect = 5e-16
 Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 18/262 (6%)

Query: 135 NLTPLFPTVRMKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPPKAGKTIMLQNIAAN 194
           N  P+ P  R  +        D+  + I+    +GKGQR  + A    GK++ L      
Sbjct: 127 NAIPINPLARKPIN----EPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTL----GM 178

Query: 195 IARNNPEVHLIVLLIDERPEEVTEMQRTV-------RGEVVASTFDEPPTRHVQVAEMVI 247
           + R      ++V LI ER  EV E    +       R  VVA+  D  P   ++  +  +
Sbjct: 179 MTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTAL 238

Query: 248 EKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGK-VLTGGVDAHALEK-PKRFFGAAR 305
             A+   +   DV++L+DS+TR A+A   +  S G+   T G       K P     A  
Sbjct: 239 TIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGN 298

Query: 306 NIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAININRSGT 365
                GS+T   T L E G  + + I +  +   +  + L R +A+   +PAI++ +S +
Sbjct: 299 GGPHQGSITAFFTVLTE-GDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 366 RREELLTADDELQRMWILRKLL 387
           R    +T D+ L     +R++L
Sbjct: 358 RVMPQITTDEHLLMSKAVRQIL 379