Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Pseudomonas simiae WCS417

Subject, 419 a.a., Transcription termination factor Rho from Enterobacter sp. TBS_079

 Score =  677 bits (1747), Expect = 0.0
 Identities = 335/418 (80%), Positives = 383/418 (91%)

Query: 1   MNLTELKQKPITDLLQLAEEMGIENMARSRKQDVIFSLLKKHAKSGEEISGDGVLEILQD 60
           MNLTELK  P+++L+ L E MG+EN AR RKQD+IF++LK+HAKSGE+I GDGVLEILQD
Sbjct: 1   MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD 60

Query: 61  GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN 120
           GFGFLRSAD+SYLAGPDDIYVSPSQIRRFNLRTGDTI GKIRPPKEGERYFALLKV+ +N
Sbjct: 61  GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN 120

Query: 121 FDRPENAKNKILFENLTPLFPTVRMKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP 180
           FD+PEN++NKILFENLTPL    R++ME GNGSTEDLT RV+DL +PIG+GQRGLIVAPP
Sbjct: 121 FDKPENSRNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP 180

Query: 181 KAGKTIMLQNIAANIARNNPEVHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV 240
           KAGKT++LQNIA +IA N+P+  L+VLLIDERPEEVTEMQR V+GEVVASTFDEP +RHV
Sbjct: 181 KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV 240

Query: 241 QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF 300
           QVAEMVIEKAKRLVEHKKDV+ILLDSITRLARAYNTV+P+SGKVLTGGVDA+AL +PKRF
Sbjct: 241 QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF 300

Query: 301 FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI 360
           FGAARN+EEGGSLTIIATAL++TGSKMDEVIYEEFKGTGNMEL L R+IAEKRVFPAI+ 
Sbjct: 301 FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY 360

Query: 361 NRSGTRREELLTADDELQRMWILRKLLHPMDEVAAIEFLIDKLKTTKTNDEFFLSMKR 418
           NRSGTR+EELLT  +ELQ+MWILRK++HPM E+ A+EFLI+KL  TKTND+FF  MKR
Sbjct: 361 NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKR 418