Pairwise Alignments

Query, 371 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 372 a.a., ABC-type multidrug transport system, permease component from Pseudomonas fluorescens FW300-N2E2

 Score =  621 bits (1602), Expect = 0.0
 Identities = 318/372 (85%), Positives = 343/372 (92%), Gaps = 1/372 (0%)

Query: 1   MHKFAHILRLGIKELTSLRHDGVLLLFLFYAFTVAIYMPAAGSVIGVHNASVAFVDEDHS 60
           MH  +HI RLG+KELTSLR+D VLLLFL YAFTVAIYMPAAGSVIGVHNASVA VDED S
Sbjct: 1   MHTLSHIWRLGLKELTSLRYDSVLLLFLGYAFTVAIYMPAAGSVIGVHNASVAIVDEDQS 60

Query: 61  SLSRQMAEALQPPEFQAPIPLAYDQLDKVMDSGEYTFVINVPANFQADLLAGRQPGVQVN 120
            LSRQ+A+ LQPPEFQ P+ L Y +LDKVMDSG YTFVINVPANFQADLLAGR+P +Q+N
Sbjct: 61  HLSRQLAQLLQPPEFQNPVALPYAELDKVMDSGRYTFVINVPANFQADLLAGREPTLQLN 120

Query: 121 VDATAMSQAFMGAGYIGRIFQRELLTYSGQAAANQA-PALLTTRALFNTNLEGGWFLAVI 179
           VDATAMSQAFMGAGYIGRIFQ+EL TY+GQA  ++A P  LTTR+LFNTNLEGGWFLAVI
Sbjct: 121 VDATAMSQAFMGAGYIGRIFQQELTTYAGQAQTSEATPVRLTTRSLFNTNLEGGWFLAVI 180

Query: 180 QIVNNITILAIILTGTALLREREHGTLDHLLVLPLTALEIMLAKIWSNMLVVVLCTWLSL 239
           QIVNNITILAIILTGTALLREREHGTLDHLLVLPLTALEIMLAKIWSN+LVVVLCTW SL
Sbjct: 181 QIVNNITILAIILTGTALLREREHGTLDHLLVLPLTALEIMLAKIWSNLLVVVLCTWASL 240

Query: 240 EVVVKGLLGVPLAGSLGLFLFVTALYLFASTALGIFLATLARSTPQFGLLAIPVIIPMLL 299
           E++VK  LGVPLAGS+ LFL VTALYLFAST+LGIFLATLARSTPQFGLLAIPVIIPMLL
Sbjct: 241 EIIVKFALGVPLAGSMVLFLLVTALYLFASTSLGIFLATLARSTPQFGLLAIPVIIPMLL 300

Query: 300 LSGGSTPLDSMPEWLQWVMQGSPSTHFVSLSAAILFRDAGVSVVWPDVLALAGIGLLFFA 359
           LSGGSTPLDSMP+WLQWVMQGSPSTH+VSLSAAILFRDAG  V+WPD+LALA IGLLFFA
Sbjct: 301 LSGGSTPLDSMPQWLQWVMQGSPSTHYVSLSAAILFRDAGPGVIWPDLLALAAIGLLFFA 360

Query: 360 VALARFRKSLAS 371
           +ALARFRKSLAS
Sbjct: 361 IALARFRKSLAS 372