Pairwise Alignments

Query, 371 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 384 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  102 bits (255), Expect = 1e-26
 Identities = 98/376 (26%), Positives = 166/376 (44%), Gaps = 20/376 (5%)

Query: 3   KFAHILRLGIKELTSLRHDGVLLLFLFYAFTVAIYMPAAGSVIGVHNASVAFVDEDHSSL 62
           +FA ++R   KE   +  D   +L  F    V +++   G  +      VA V E+ + L
Sbjct: 19  RFAALVR---KESYQVIRDPSSILIAFVLPLVLLFLFGYGVSLDTTRTRVALVVEEATPL 75

Query: 63  SRQMAEALQPPE-FQAPIPLAYDQLDKVMDSGEYTFVINVPANFQADLLAGRQPGVQVNV 121
           +R +A + +    F         + +  +  G    ++ +PA F A+  AGR P VQV V
Sbjct: 76  TRDLAASFEASRYFSVATGRDRREFEDDLVLGRVRGILVIPAGFAAEHAAGRHPSVQVIV 135

Query: 122 DATAMSQAFMGAGYI-GRIFQRELLTYSGQAAANQAPALLTT-RALFNTNLEGGWFLAVI 179
           D +  + A     Y  G +   E    S     +  PA+    R  FN  L    FL   
Sbjct: 136 DGSDPNTANFVQNYAQGAVANWERQRLS--EGRSPPPAIAAEQRFWFNPQLTSRNFLVPG 193

Query: 180 QIVNNITILAIILTGTALLREREHGTLDHLLVLPLTALEIMLAKIWSNMLVVVLCTWLSL 239
            I   +T++  +LT   + RE E GT++ ++  P++A E++  K+    ++ +    L +
Sbjct: 194 SIAIVMTLVGTLLTSLVVAREWERGTMEAMMATPVSAAELLAGKLLPYFVLGLTSMTLCV 253

Query: 240 EVVVKGLLGVPLAGSLGLFLFVTALYLFASTALGIFLATLARSTPQFGLLA-IPVIIPML 298
            V V  L  VP  GS+     ++A +L  +   G+ ++   ++      LA I   +P  
Sbjct: 254 LVAV-FLFDVPFRGSVAALYALSATFLMPALGQGLLISAATKNQFLASQLALISAFLPAF 312

Query: 299 LLSGGSTPLDSMPEWLQWVMQGSPSTHFV-SLSAAILFRDAGVSVVWP----DVLALAGI 353
           LLSG    ++SMP  +QWV    P+ + + SL    L  D     +WP     +  +  I
Sbjct: 313 LLSGFLFEINSMPTVIQWVTYAVPARYLIPSLQTVFLAGD-----IWPMFARAIAVMFLI 367

Query: 354 GLLFFAVALARFRKSL 369
           G +FFA+A    RK +
Sbjct: 368 GCMFFALAARSTRKRI 383