Pairwise Alignments

Query, 371 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 370 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  133 bits (335), Expect = 7e-36
 Identities = 99/361 (27%), Positives = 178/361 (49%), Gaps = 5/361 (1%)

Query: 12  IKELTSLRHDGVLLLFLFYAFTVAIYMPAAGSVIGVHNASVAFVDEDHSSLSRQMAEALQ 71
           +KEL ++  D      L     + + + +  + + V N  +  ++ D+   S+++ + + 
Sbjct: 11  VKELLAVLRDPKGRTVLIGPPIIQLLVFSYAATLEVTNVDLMVLNRDNGHWSQELVQQVG 70

Query: 72  PPEFQAPIPLAYD--QLDKVMDSGEYTFVINVPANFQADLLAGRQPGVQVNVDATAMSQA 129
                  I LA    ++   +D+     V+ +   F  D+ AGR   VQ+ +D    + +
Sbjct: 71  GSPTFRSIELASSPHEVRLAIDTQRVLAVVEIGPTFSRDIEAGRPAEVQMILDGRRSNAS 130

Query: 130 FMGAGYIGRIFQRELL-TYSGQAAANQAPALLTTRALFNTNLEGGWFLAVIQIVNNITIL 188
            + +GY+GRI       T +G+ AA++    +  R  FN NL   WF+    + +   ++
Sbjct: 131 QIVSGYLGRIVGAVAAETPAGKRAASET-IRVEARNWFNPNLTYQWFMVPNLVASIALLI 189

Query: 189 AIILTGTALLREREHGTLDHLLVLPLTALEIMLAKIWSNMLVVVLCTWLSLEVVVKGLLG 248
            +I+T  ++ RERE GT D L+V PL   EI+L K+   M++ +    + +   V  + G
Sbjct: 190 GLIVTALSVARERELGTFDQLIVSPLRTHEILLGKLIPPMMIGLFHITIYILAAVF-IFG 248

Query: 249 VPLAGSLGLFLFVTALYLFASTALGIFLATLARSTPQFGLLAIPVIIPMLLLSGGSTPLD 308
           VPL GSL L       YL A   LG+F++ L+ +  Q  L A   ++P +LLSG +TP++
Sbjct: 249 VPLRGSLFLLYGSAIFYLAAVVGLGLFISALSMTQQQAILGAFLFMVPAMLLSGFATPIE 308

Query: 309 SMPEWLQWVMQGSPSTHFVSLSAAILFRDAGVSVVWPDVLALAGIGLLFFAVALARFRKS 368
           +MP WLQ V   +P  +F+ +   +  +D  ++ V    L L  I ++  + A   FR+ 
Sbjct: 309 NMPSWLQPVTLINPLRYFLVIVKGVFLKDIPLAEVVHQTLPLCLIAIVTLSSAAWLFRRR 368

Query: 369 L 369
           L
Sbjct: 369 L 369