Pairwise Alignments

Query, 371 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 375 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 70.1 bits (170), Expect = 9e-17
 Identities = 78/302 (25%), Positives = 123/302 (40%), Gaps = 31/302 (10%)

Query: 52  VAFVDEDHSSLSRQMAEALQPPEFQAPIPLA-YDQLDKVMDSGEYTFVINVPANFQADLL 110
           VA VD D+SSLSR++   +      +PI  A   Q +  M+  E   ++ VP  F  DL 
Sbjct: 47  VAMVDLDNSSLSRELGRHIAASPVISPISFASLPQAEDAMNRAEVYALVVVPHGFSRDLK 106

Query: 111 AGRQPGVQVNVDATAMSQAFMGAGYIGRIFQREL--LTYSGQAA---------ANQAPAL 159
            G QP V V  +   +    + A  + +     +  L YS Q A          N AP  
Sbjct: 107 TGAQPTVDVRYNGQFLLVGKLLAANLQQAIADAMKPLAYSKQLAHGANPHQAHINIAPIA 166

Query: 160 LTTRALFNTNLEGGWFLAVIQIVNNITILAIILTGTALLRERE-HGTLDHLLVLPLTALE 218
             T ALFN N     FL    ++    + A+++   AL RE E     D + +LP    +
Sbjct: 167 TQTTALFNRNNNYVGFLVPPVLIALWQLTAMLVFANALNRELEPSARCDSVGLLPRLGAK 226

Query: 219 IM----LAKIWSNMLVVVLCTWLSLEVVVKGLLGVP--LAGSLGLFLFVTALYLFASTAL 272
           ++    L  +    +  +L  +L L V    L  +P  LA  L +FL V  ++L    + 
Sbjct: 227 LLCYMPLLMLQGLFIHALLFGYLKLPVAASPLWLIPAMLALLLAVFLIVAVIFLLMQESA 286

Query: 273 GIFLATLARSTPQFGLLAIPVIIPMLLLSGGSTPLDSMPEWLQWVMQGSPSTHFVSLSAA 332
            +     A   P F  +            G + P+  MP   Q+     PS+H++    A
Sbjct: 287 RVVSFCTALFAPAFAFM------------GVTFPVQDMPAAAQYWRLLMPSSHYIDSHIA 334

Query: 333 IL 334
           ++
Sbjct: 335 LV 336