Pairwise Alignments

Query, 334 a.a., iron ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 335 a.a., iron(III) ABC transporter, periplasmic iron(III)-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  218 bits (555), Expect = 2e-61
 Identities = 117/314 (37%), Positives = 186/314 (59%), Gaps = 6/314 (1%)

Query: 20  TVQAADEVVVYSSRIDELIKPVFDAYTQKTGVQVKFITDKEAPLMQRIKAEGENATADLL 79
           +  A +++ VYS R   L++P+   +T++TG+ V  +  K+  + +RI  EG  + ADL+
Sbjct: 18  SAHADEKLTVYSYRQAFLVEPILKRFTEETGIGVNVVFAKDG-IAERIAREGRLSPADLV 76

Query: 80  LTVDAGNLWQAEQMGILQPFTSPVIDKNIPLQYRSSKHTWTGLSLRARTIAYSTDRVKPG 139
           LT D   L +  +  +  P  S  +D NIP QYR  +  W  L++R R I  + DR+ P 
Sbjct: 77  LTSDFSRLVELVEKDLTSPVQSAQLDNNIPAQYRDPEGQWYALTMRVRNIYTAKDRLGPQ 136

Query: 140 DLTTYEALADKQWEGRLCLRTAKKVYNQSLTATLIETHGAAKTEEIVKGWVNNLSTDVFS 199
            +  YE LAD +++G++C R+ K  YN +L A++I  HG A T+  ++G   NL+     
Sbjct: 137 AIR-YEELADPKYKGKICTRSGKHPYNIALVASMIAHHGEADTKTWLQGVKTNLARKPQG 195

Query: 200 DDIAVLEAINAGQCDVGIVNTYYYGRLHKQKPDL----AVKLFWPNQGDRGVHVNLSGIG 255
           +D   ++A+  G CD+ I N+YYYG + +    +    AV + +PNQ DRG HVN+SG+ 
Sbjct: 196 NDRGQVQAVKEGLCDIAIGNSYYYGNMLQDPEQMSWAEAVVINFPNQADRGAHVNVSGMV 255

Query: 256 LTQHAPHPEAAKALVEWMTTPEAQKIFADVNQEFPANPAVAPSAEVASWGKFVADTLPVE 315
           L +HAP+ + A  L+E+++   AQK +A+VN E+P    VAPS  VASWG+F AD LP+ 
Sbjct: 256 LARHAPNKDNAIKLMEFLSGDVAQKAYAEVNMEYPVKADVAPSTLVASWGEFKADQLPIF 315

Query: 316 VAGKRQAEAIRLMD 329
              +    A++L+D
Sbjct: 316 KLAEYHQAAVKLLD 329