Pairwise Alignments

Query, 306 a.a., protease from Pseudomonas simiae WCS417

Subject, 268 a.a., hypothetical protein from Methanococcus maripaludis S2

 Score =  189 bits (480), Expect = 6e-53
 Identities = 103/263 (39%), Positives = 169/263 (64%), Gaps = 8/263 (3%)

Query: 7   LLLFVGLAIAILFMGFKVVPQGYQW-TVERFGRYTNTLKPGLNIIIPVMDRIGRKINVME 65
           L L +G+ + +L +   ++   ++   + R G+    L PG+N IIP +D +  K++V  
Sbjct: 5   LNLLLGIFLLVLIIKSVIIVNQFELGLIFRLGKVRGRLNPGVNFIIPFID-VPIKVDVRT 63

Query: 66  SVLDIPPQEVITADNATVQIDAVCFFQVVNTAQAAYEVNNLEHAIRNLLQTNIRTVLGSM 125
            V+D+PPQE+IT DNA V+IDAV +++V++  +A  EV N ++AI NL QT++R ++GS+
Sbjct: 64  KVIDVPPQEMITRDNAGVRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAIIGSL 123

Query: 126 ELDAMLSQRDGINEKLLKTVDEATAPWGIKITRIEIKDISPPADLMAAMSGQMKAERIKR 185
           ELD  L++R+ IN +LL+T+D  T  WG+K+ ++E+++I PP D+  AM+ QMKAER+KR
Sbjct: 124 ELDDALNKREFINSQLLETLDRDTDAWGVKVEKVELREIEPPTDIKNAMTQQMKAERLKR 183

Query: 186 AQILEAEGLRASAILTAEGKKQAQILEAEGSRQAAFLESEARERQAEAEA---RATQVVS 242
           A ILEAEG + S IL A+G  ++  +EAEG  +A  + +E+ +   + EA   +A  V S
Sbjct: 184 AAILEAEGEKQSKILKAQGTAESMKIEAEGQAKAIQIVAESAQNYFKNEAQLYKALDVTS 243

Query: 243 EAIASGNVQAVN---YFVAQKYI 262
             +       ++     VA+K+I
Sbjct: 244 NTLKDNTKFVISENIMDVAKKFI 266