Pairwise Alignments

Query, 364 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 369 a.a., extracellular solute-binding protein, family 1 (NCBI) from Rhodospirillum rubrum S1H

 Score =  348 bits (893), Expect = e-100
 Identities = 177/347 (51%), Positives = 248/347 (71%), Gaps = 3/347 (0%)

Query: 20  AAQADDKVLHVYNWSDYIAPDTIANFEKESGIKVVYDVFDSNETLEAKLLAGKSGYDIVV 79
           AA A+DKVL+VYNWSDYIA DT+A F+ E+GIKV YDV+DSNE LE+KLLAG SGYDIVV
Sbjct: 22  AAAAEDKVLNVYNWSDYIAEDTLAKFQAETGIKVNYDVYDSNELLESKLLAGSSGYDIVV 81

Query: 80  PSNNFLAKQIKAGVYQELDKSKLSNYDNLNKSLLKAVSVSDPDNKHAFPYMWGSIGIGYN 139
           P+++ L++ I+AG+ Q+LDK+K+ N  NL+  L    +  D DN H+  Y WG+ G+G N
Sbjct: 82  PTDHTLSRLIQAGIVQKLDKAKIPNLANLDPKLTARAAAYDADNAHSVIYEWGTNGLGIN 141

Query: 140 PEKVKAALGVD-KIDSWDVLLKPENIAKLKSCGVSFLDSPTEMLPVALHYLGLPTDTQKK 198
            +KV+AALG D K+DS+D+L KPE   KL SCG+  LDS  E+  VA +YLGL  ++   
Sbjct: 142 IDKVRAALGPDVKLDSFDLLFKPEYAEKLASCGIHVLDSAAEVFSVARNYLGLEPNSTDP 201

Query: 199 ADLKQAEDLFLKIRPSIGYFHSSKYISDLANGNICVAVGYSGDI--EQAKSRAAEAGGKV 256
            DL++A  L++ +RP I  FHSS++I+ LANG+ICVA GYSGDI   QA++RA EA   V
Sbjct: 202 KDLEKATALWMGVRPYIQKFHSSEFINALANGDICVAFGYSGDIFQAQAQARAKEAANGV 261

Query: 257 KVAYDIPKEGAGSFFDMVAIPKDAENVDAAYKFMNYLLKPQVMAEITNSVHFPNGNEKAT 316
           K+ Y IPKEG   +FD++A+P DA + + A+KF++++L+PQ+ A+I+N V + N N KAT
Sbjct: 262 KIDYIIPKEGTLIWFDLMAVPADAPHPENAHKFIDFILQPQISADISNYVWYANANSKAT 321

Query: 317 ALVDKEITSDPGIYPPADVQAKLYAIADLPAATQREMTRSWTKIKSG 363
            L+D+ + ++P IYP  +V  +L+         +R  TR+W KIK+G
Sbjct: 322 ELLDEAVRTNPSIYPTQEVMDRLFIQKTASPEMERLRTRAWNKIKTG 368