Pairwise Alignments

Query, 380 a.a., putrescine ABC transporter, ATPase component (from data) from Pseudomonas simiae WCS417

Subject, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  276 bits (706), Expect = 7e-79
 Identities = 151/361 (41%), Positives = 227/361 (62%), Gaps = 6/361 (1%)

Query: 20  KVLVKIDRVTKKFDETIAVDDVSLEIKKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRI 79
           K ++++  ++K FD    + +++L++  GE   +LG SG GK+T+LRM+AGFE   +G+I
Sbjct: 15  KPVIRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQI 74

Query: 80  YLDGEDITDMPPYERPINMMFQSYALFPHMTVAQNIAFGLQQDKIPKAEIDARVAEMLKL 139
            LD +D+T +P  +R +N +FQSYALFPHMTV +N+AFGL+  K+P++EI+ RV E L++
Sbjct: 75  LLDDQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRM 134

Query: 140 VQMSQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEII 199
           V++++ A+RKPHQLSGGQ+QR+A+AR++  +PK+LLLDE + ALD KLR QMQ EL ++ 
Sbjct: 135 VRLAEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQ 194

Query: 200 ERVGVTCVMVTHDQEEAMTMAERIAIMHLGWIAQIGSPIDIYETPTSRLVCEFIGNVNIF 259
            ++G+T + VTHDQEEA++M++RI +M  G I Q GSP +IYE P +  V  FIG +N+F
Sbjct: 195 RQLGITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVF 254

Query: 260 DTQVVDDAEGHAV-LKCPDLDRDIYVGYGIATSVEDKSVTYAIRPEKLLVTTEMPTCEHN 318
               +D  +   + +    ++  +Y  Y       DK +   +RPE L +  E+   E  
Sbjct: 255 QATTIDRIDEKRIRVDIEGIESIVY--YEDEVKAGDK-LQVLLRPEDLRI-EEIKESEEK 310

Query: 319 WSSGKVHDIAYLGGHSVFYVELPSGKLVQ-SFVANAERRGQRPTWGDQVYVWWEDDSGVV 377
              G V D  Y G      VEL SG  V  S   N +      + G +V V W +   VV
Sbjct: 311 GIVGHVTDRTYKGMTLESVVELESGMCVMVSEFFNEDDPDVDHSIGQKVAVTWVESWEVV 370

Query: 378 L 378
           L
Sbjct: 371 L 371