Pairwise Alignments

Query, 380 a.a., putrescine ABC transporter, ATPase component (from data) from Pseudomonas simiae WCS417

Subject, 378 a.a., polyamine ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  552 bits (1423), Expect = e-162
 Identities = 273/380 (71%), Positives = 316/380 (83%), Gaps = 2/380 (0%)

Query: 1   MAVASGAYKKALEGDQTPKKVLVKIDRVTKKFDETIAVDDVSLEIKKGEIFALLGGSGSG 60
           MA+ SG   K     +T  +VL+KI+RV+K FD+  AVDDVSL I KGEIFALLGGSGSG
Sbjct: 1   MAMTSGVTNKPTT--KTQDEVLLKIERVSKLFDDVRAVDDVSLTINKGEIFALLGGSGSG 58

Query: 61  KSTLLRMLAGFERPTEGRIYLDGEDITDMPPYERPINMMFQSYALFPHMTVAQNIAFGLQ 120
           KSTLLRMLAGFERPTEGRIYLDG+DITD+PPYERPINMMFQSYALFPHMTV QNIAFGL+
Sbjct: 59  KSTLLRMLAGFERPTEGRIYLDGQDITDLPPYERPINMMFQSYALFPHMTVEQNIAFGLK 118

Query: 121 QDKIPKAEIDARVAEMLKLVQMSQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPM 180
           QDK+ KA+I  RV EMLKLV M QYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPM
Sbjct: 119 QDKMSKADISQRVQEMLKLVHMEQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPM 178

Query: 181 GALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAERIAIMHLGWIAQIGSPIDI 240
           GALDKKLR+QMQLE+VEI+ERVGVTCVMVTHDQEEAMTMA RIAIM  GWIAQ+GSP+DI
Sbjct: 179 GALDKKLRTQMQLEVVEILERVGVTCVMVTHDQEEAMTMAGRIAIMSDGWIAQVGSPMDI 238

Query: 241 YETPTSRLVCEFIGNVNIFDTQVVDDAEGHAVLKCPDLDRDIYVGYGIATSVEDKSVTYA 300
           YE+P SR++ EFIG VN+FD ++++D   HA+LK P L +   +G+G+ TS+EDK V  A
Sbjct: 239 YESPNSRMIAEFIGTVNLFDCEIIEDEADHAILKSPTLPQPFLIGHGVTTSLEDKHVWLA 298

Query: 301 IRPEKLLVTTEMPTCEHNWSSGKVHDIAYLGGHSVFYVELPSGKLVQSFVANAERRGQRP 360
           +RPEK L+T E P  E+NW+ GKVHDIAYLGG SV+Y++L   K++Q  + N ERR   P
Sbjct: 299 VRPEKTLITREQPEGEYNWARGKVHDIAYLGGLSVYYIKLEDDKIIQCSMTNTERRADHP 358

Query: 361 TWGDQVYVWWEDDSGVVLRS 380
           TWGD +Y+ WE  SGVVLRS
Sbjct: 359 TWGDDIYISWEATSGVVLRS 378