Pairwise Alignments

Query, 321 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 333 a.a., transcriptional regulator, AraC family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  215 bits (547), Expect = 1e-60
 Identities = 126/325 (38%), Positives = 184/325 (56%), Gaps = 11/325 (3%)

Query: 5   VAILIFPGVQSLDVTGPLDVFCEANRFLSPQDH---YQLDVIGLGHGSMAASNGLSLQAH 61
           +   ++PG   LD+ GPLDVF  A R    Q     Y+   +    G + +S+G+S+ A 
Sbjct: 8   IVFALYPGFVGLDLAGPLDVFSCAARLAGRQGRPAPYRCHFVARALGPVVSSSGMSVLAE 67

Query: 62  RH---YSEALQAYDL-----LLVAGGPQLPFEDFGAEFDDWLRSATARAQRFGSICNGAF 113
                +   +   D      L+V GG     E    E    +    ARA+R  S+C GA 
Sbjct: 68  TTPDAFDATVAGPDAPAPHTLVVPGGVTPGREGDDPELRAMVAGLAARARRVVSVCTGAL 127

Query: 114 MLARAGLLDGKTVTTHWNDAADLARLCPTAQVDADRLYVQDGNLYTSAGVTAGIDLSLYL 173
           +LA  GLLDG+  TTHW   A LA   P  +V+ D ++V+DG + TSAGVTAGIDL+L+L
Sbjct: 128 LLAACGLLDGRRATTHWQACARLAAAYPAVRVEPDAIFVRDGGVVTSAGVTAGIDLALHL 187

Query: 174 LAQDHGPEVALSVAKRLVVFTQRSGGQSQFSPFLTPHAETTSAVALVQLYVLANLTGDLT 233
           + +D GP  A+ VA+ LVV+ +R G QSQFS  L   A   +    + +++ A L  DL 
Sbjct: 188 VEEDLGPATAMEVARLLVVYRRRVGNQSQFSAPLRAQARAGARFGPLHVWMEARLGEDLG 247

Query: 234 IADLAKAANMSARNFSRVFAREARITPAEFVERARVDAARVMLESSRAPLKTVAYQCGFR 293
           +  LA  A+MS R+F+RVF +E  ++PA +VE+ R+D AR +LES  + ++TVA   GF 
Sbjct: 248 VERLAGQAHMSPRHFARVFPQETGMSPARYVEQLRLDRARELLESGESHMQTVAVAAGFG 307

Query: 294 DAQHMRSVFNRRLGVTPQQFRLNFA 318
             + +R  F RR+GVTP Q+  +F+
Sbjct: 308 SEERLRRAFQRRMGVTPSQYLEHFS 332