Pairwise Alignments

Query, 164 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 248 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 61.6 bits (148), Expect = 9e-15
 Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 2/112 (1%)

Query: 31  ELRIALEANTPPFNFKEGDKLTGFEVELGEQLAKEMDVRPSFITTDDADLLPGVETGKYD 90
           E+++ +     PF F + D+L GFEV++  ++ K  D +  F+T + + LL  +ETG+ D
Sbjct: 24  EVKVGMSGRYFPFTFVKQDELQGFEVDVWNEIGKRNDYKVEFVTANFSGLLGLLETGRID 83

Query: 91  VAINHIAMTAELQDRFDFSEPYSEKPELAIPFQKGNPAFKASLDKALGRVKA 142
              N I +T   + ++ FS+PY       I  +KGN A K  +D   G+  A
Sbjct: 84  TISNQITITDARKAKYLFSDPY-VIDGAQITVRKGNEAIK-GIDDLAGKTVA 133



 Score = 31.2 bits (69), Expect = 1e-05
 Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 9/103 (8%)

Query: 60  EQLAKEMDVRPSF-ITTDDADLLPGVETGKYDVAINHIAMTAELQDRFDFSEPYSEKP-- 116
           EQL +  D      I T D  +   V  G+ D  +       EL ++       +  P  
Sbjct: 141 EQLLRNHDKDGKINIKTYDTGIEHDVALGRADAFVMDRLSALELIEKTGLPLQLAGSPFE 200

Query: 117 --ELAIPF---QKGNPAFKASLDKALGRVKADGRLKALAQKWF 154
             E A PF   +KG    +  ++KAL  ++ADG L  +A KWF
Sbjct: 201 TIENAWPFVNNEKGQQ-LQGEVNKALAAMRADGTLSQIALKWF 242