Pairwise Alignments

Query, 164 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 248 a.a., extracellular solute-binding protein family 3 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 66.6 bits (161), Expect = 3e-16
 Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 13/138 (9%)

Query: 6   GLLLLLPLLSPLAHAELIDDVFDRGELRIALEANTPPFNFK-EGDKLTGFEVELGEQLAK 64
           GL L+  L +P    +L+          +A + N  PF FK E  K TGF++EL + +AK
Sbjct: 10  GLALVAALCAPAMAKKLV----------VAHDTNFKPFEFKGEDGKYTGFDIELWQAVAK 59

Query: 65  EMDVRPSFITTDDADLLPGVETGKYDVAINHIAMTAELQDRFDFSEPYSEKPELAIPFQK 124
            + V       D   ++PG++TG  DV I  I + AE Q   DFS+PY +   L I  ++
Sbjct: 60  IVGVEYELQPMDFNGIIPGLQTGNIDVGIAGITIKAERQQVIDFSDPYYDS-GLMILVRE 118

Query: 125 GNPAFKASLDKALGRVKA 142
           G+ A K S++   G++ A
Sbjct: 119 GDTAIK-SVEDLKGKIVA 135



 Score = 32.0 bits (71), Expect = 8e-06
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 83  GVETGKYDV-AINHIAMTAELQDRFDFSEPYSEKPELAIPFQKGNPAFKASLDKALGRVK 141
           G +   +D+  +   AMTA  + +     P  +     I F KG+P   A +++AL + K
Sbjct: 172 GADAVVFDMPVVKEFAMTAG-KGKVKTVGPLYQGQSYGIGFPKGSPLV-AKVNEALKKAK 229

Query: 142 ADGRLKALAQKWF 154
           ADG  + L  KWF
Sbjct: 230 ADGTYEKLYIKWF 242