Pairwise Alignments

Query, 164 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 250 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score = 58.2 bits (139), Expect = 1e-13
 Identities = 28/81 (34%), Positives = 46/81 (56%)

Query: 32  LRIALEANTPPFNFKEGDKLTGFEVELGEQLAKEMDVRPSFITTDDADLLPGVETGKYDV 91
           L + +  +  P ++ E  +  GFEVEL  +++K +D++P F+    ++LL  V  G+ D 
Sbjct: 32  LTVGVCTDLAPTSYIEDGEFKGFEVELIYEISKRLDLQPEFVVYSFSELLDAVSEGEVDC 91

Query: 92  AINHIAMTAELQDRFDFSEPY 112
            I +I  T E Q + DFS PY
Sbjct: 92  GIGYIGKTPERQLKMDFSRPY 112



 Score = 36.2 bits (82), Expect = 4e-07
 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 5/98 (5%)

Query: 60  EQLAKEMDVRPSFITTDDADLLPGVETGKYDVAI-NHIAMTAELQDRFDFSEPYSEKPEL 118
           E L K MD +   I  +  D+   + +GK D  + +HI     +QD     +   +K ++
Sbjct: 151 ESLLKSMDFK-IIIYENQNDINNDLLSGKIDSEVTDHITSLYLIQDYDTELKIVGDKFDI 209

Query: 119 ---AIPFQKGNPAFKASLDKALGRVKADGRLKALAQKW 153
              AI     NP  K S+D AL  ++ DG L  L +KW
Sbjct: 210 IYVAIAIDNTNPELKKSIDVALLEMENDGTLVKLKEKW 247