Pairwise Alignments

Query, 287 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  107 bits (267), Expect = 3e-28
 Identities = 76/259 (29%), Positives = 123/259 (47%), Gaps = 11/259 (4%)

Query: 5   ELKAFFMVARLGSITQAAKKLGLSQPTVTTQVRNLESQYGVELFYRGGRRLTVSDEGARL 64
           +L+ F  + +  S+T AA+ L LS+  V+  +  LE Q G  LF R   RL ++ EG +L
Sbjct: 9   QLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQEGQKL 68

Query: 65  LPMVKALLQQEADIEFFLRNSGQVQGALRIAAT-------APYYILDLVKAFRERLPHVE 117
           LPM   LLQ+  DI+        + G LRI ++       APY    L+ AFR+  PH  
Sbjct: 69  LPMADELLQRAKDIDRLFAEQQVLTGKLRIGSSDTIGNQVAPY----LISAFRQLHPHPS 124

Query: 118 VSVEIGNSQQVLEALDDYRVDLAASSQLLEDPRLIRRVLGTDPLVLAVHRHHPLAKLDHV 177
            S+ I NS QV + L DY +D+         P LI      D + +     HPLA+ + +
Sbjct: 125 QSLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQERL 184

Query: 178 PLTALVGHTLLMREAGSTTRRLTEKMLQDAGVSYGPLLEIGSRESIREAVLRNIGISIIA 237
            ++       ++REAGS +R    +++      +    E+ + E++  +V   +G+  ++
Sbjct: 185 VMSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIEAFELNTTEALINSVSSGLGLGCLS 244

Query: 238 RQEVPHDPQLRVLTIENAP 256
           R       Q   + I N P
Sbjct: 245 RLAAKTPQQDGRVVILNIP 263