Pairwise Alignments

Query, 287 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 296 a.a., LysR family transcriptional regulator from Methanococcus maripaludis S2

 Score =  104 bits (259), Expect = 3e-27
 Identities = 88/284 (30%), Positives = 142/284 (50%), Gaps = 21/284 (7%)

Query: 7   KAFFMVARLGSITQAAKKLGLSQPTVTTQVRNLESQYGVELFYRGGRRLTVSDEGARLLP 66
           + F   A+  S ++AAKKLG++Q TV+  +  LE  +  +LF R    + ++ EG  L  
Sbjct: 9   QTFLFAAKTKSFSKAAKKLGVTQGTVSNHISVLEKFFDAQLFLRTPEGVDLTTEGNILYE 68

Query: 67  MVKALLQQEADIEFFLRNSGQ-VQGALRIAATA-------PYYILDLVKAFRERLPHVEV 118
             + LL+  ++ +  +R   +  +G +RIAA+        P  I D  K +R+    V  
Sbjct: 69  NAEKLLENISNAKQQMRILHEHPEGLIRIAASTTPGEHLLPSIIKDYTKVYRD----VSF 124

Query: 119 SVEIGNSQQVLEALDDYRVDLAASSQLLEDPRLIRRVLGTDPLVLAVHRHHPLAKLDHVP 178
            ++I +S++  + L+D  VD+ A   +  D      V+G D LVL V   H LAK     
Sbjct: 125 QIQITDSEKCFKLLEDRAVDIIAVGNIY-DGSYESEVIGKDRLVLVVPPDHELAKKGVAK 183

Query: 179 LTALVGHTLLMREAGSTTRRLTEKMLQDAGVSYGPL---LEIGSRESIREAVLRNIGISI 235
           L+ ++    + RE GS TR +    LQD G S   L   + +GS  SI  AV    GISI
Sbjct: 184 LSDILKEDYIDREVGSGTREIFVDALQDKGYSMMDLHTIMSLGSNSSIITAVSEGYGISI 243

Query: 236 IAR---QEVPHDPQLRVLTIENAPQIPEYLYCLKERKGARLPAA 276
           I+    ++     QL+++ IE+   +  Y+Y +K +K  R P+A
Sbjct: 244 ISEIPAKKAADAGQLKIVPIEDL-DLTRYMYLVKGKK-PRNPSA 285