Pairwise Alignments

Query, 337 a.a., phosphonate ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  126 bits (316), Expect = 9e-34
 Identities = 85/338 (25%), Positives = 148/338 (43%), Gaps = 13/338 (3%)

Query: 3   KPLALVAAVLTAFSLNAFAK-TELTVYTALEAEQLKTYKKAFE---------QANPDIEI 52
           K L  + A+    ++  FA  TE       + EQ+ T   A+          + +  I++
Sbjct: 2   KNLKGILAIFCVMAVLVFAGCTEQQASNVSQEEQIVTVYVAYGSLDLIADEFEKDTGIKM 61

Query: 53  KWVRDSTGIITAKLLAEKDRPQADAVWGLAASSLAILDQQGMLDNYAPKDLEKIGKNYRD 112
           ++V  S+G   ++L AE+  P AD   G    +     Q G+L+ Y   + + I   + +
Sbjct: 62  EYVSLSSGEALSRLKAEQSNPSADVWLGGGIDAFISAQQDGLLEAYKSPNAKDIDPLFVE 121

Query: 113 AANPPAWVGMDVWAATICFNTVEAEKQGLTKPVSWQDLTKPEYKGKIVMPNPASSGTGFL 172
                 W G+ +    I  NT    ++GL +P +W DL   +YKG+++  NP  SGT + 
Sbjct: 122 EDG--YWTGVSLVTIGILENTDLLSEKGLPEPQTWDDLITDDYKGELIASNPTVSGTAYF 179

Query: 173 DVSAWLQTYGEKQGWQYMDDLHQNIGQYVHSGSKPCKLAASGEFPIGISFEYPAVQLKRQ 232
            +   LQ YGE +GW Y+D  +QN       GS P  L  +GE+  G++ +     +   
Sbjct: 180 TICGILQMYGEDEGWNYLDKFYQNTPFLTKRGSGPGNLVTAGEYAYGVAPDPHTTVIADS 239

Query: 233 GAPLDIILPKEGLGWDIEATAVMKGTPHADAAKKLADFSASSAAMDLYKDNFAVLAQPGI 292
             P+  +   + + W     +++ G  H + AK   D+  S    ++       +   G 
Sbjct: 240 ELPVKSVFLNKVIWWP-SPVSIVSGAKHPENAKIFVDWCLSKEGQEVLMQASPRVPVRGD 298

Query: 293 AKPQTELPADYEQRLIKNDFAWASKNRDSILTEWRKRY 330
            +    +P   +   +  DF +  +NRD IL EW  RY
Sbjct: 299 IEVIEGVPNPKDLDFLDMDFMYWGENRDRILDEWESRY 336