Pairwise Alignments

Query, 398 a.a., SAM-dependent methyltransferase from Pseudomonas simiae WCS417

Subject, 396 a.a., hypothetical SAM-dependent methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  211 bits (536), Expect = 4e-59
 Identities = 131/395 (33%), Positives = 210/395 (53%), Gaps = 10/395 (2%)

Query: 6   LRLKANADRRLRNGHLWVYSNEI-DVAATPLHGFQAGDQAILEAAGGKTLGIVAMSPNNL 64
           ++LK   ++ L   H WV+SN I +V   P    + G    + A  G  LG  A S  + 
Sbjct: 5   IKLKPGREKSLERRHPWVFSNGIHNVKGKP----EPGQTVDVVAHDGHWLGRGAWSGESQ 60

Query: 65  ICARLLSRDIKLPLDKSLLVHRLNVALSLRDRLFDKPF---YRLVYGDSDLLPGLVVDRF 121
           I  R+ + D +  +D+     R+  A + RD L  +     YRL+  +SD LPG+ +D++
Sbjct: 61  IQVRVWTFDREEEIDREFFKRRILRAQAGRDDLIREQGLTGYRLIAAESDGLPGITIDKY 120

Query: 122 GDILVVQIASATMEAHKEDVIAALTQVLKPSGILFKNDSAARDAEGLNRYVETVFGLVPE 181
            ++LV Q+ S   +  ++ ++  L ++     I  ++D  +R  EGL   +  + G +PE
Sbjct: 121 ANVLVCQLLSMGADVWRDTIVDVLAELYPDCAIYERSDVDSRKKEGLASTMGLLHGTLPE 180

Query: 182 W-VALEENGVKFEAPVIQGQKTGWFYDHRMNRARLAPYAKGKRVLDLYSYIGGWGVQAAA 240
             + +EENG+K    V +G KTG++ D R NRA  A + KGK VL+ + Y G +G+ AA 
Sbjct: 181 MPLIIEENGIKIAVDVTKGHKTGFYLDQRDNRAIAARFVKGKSVLNCFCYTGTFGLYAAK 240

Query: 241 FGASEVFCVDASAFALDGVERNAALNGFAE-KMTCIEGDVFEALKELKASEERFDVIVAD 299
            GA+ +  VD S+ ALD    N  +NG ++  +   E DVF+ L++ +   + FDVIV D
Sbjct: 241 AGAASIENVDVSSLALDTARLNMRVNGLSDDNVHYNEADVFKLLRQYRDEGKTFDVIVLD 300

Query: 300 PPAFIKRKKDMKNGEGAYRRLNEQAMRLLSKDGILVSASCSMHLPEDDLQNILLTSARHL 359
           PP F   K  +      Y+ +N  A++LL+  G+L++ SCS  +P D  Q I+  +A   
Sbjct: 301 PPKFADNKSQLNGACRGYKDINMIALQLLNPGGVLLTFSCSGLMPADLFQKIVADAALDA 360

Query: 360 DRNIQMLERGGQGPDHPVHPAIAETRYIKSITCRL 394
            R IQ +ER  Q  DHP+  A  E  Y+K +  R+
Sbjct: 361 KREIQFIERLSQASDHPIGSAFPEGFYLKGLVARV 395