Pairwise Alignments

Query, 288 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 290 a.a., HDOD domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score = 72.8 bits (177), Expect = 8e-18
 Identities = 46/190 (24%), Positives = 88/190 (46%), Gaps = 4/190 (2%)

Query: 19  VPPQPQIMVDLQMEQYMPDPDLEVIARLISQDPGLSGALLKIVNSSYFGLSNKIASIQRA 78
           +P   +++ +L      PD D   +++ I+ D  L+  LL++ NS+YFG +  IA++  A
Sbjct: 27  LPRLSKVLQELLDMANQPDVDFHQLSKKITLDQILTARLLRMANSAYFGGNGHIATVNDA 86

Query: 79  VNLLGSRSIINLINALSIKGEMSDDTIVTLNRFWDTAQDVAMTCLTLAKRTGAQAVDEAY 138
           +  +G  S+  L+ A  +         + LN +W    + A+    +A++ G     E +
Sbjct: 87  IIRVGIESVRTLVVASVLSSTFPKIETLDLNDYWTNTFETALIASKIAEQVGLDK-SETF 145

Query: 139 ALGLFHDCGVPLMLKRFPNYMSVLEQAYANAGPDSRVVDTENNAFNTNHAVVGYYTAKSW 198
             G+ H+ G  ++    P   S+++Q  A  G D   +  +      +   +G   AK W
Sbjct: 146 TTGVLHNIGELMIHTLMPTEASLIQQKIAQ-GMDP--LSAQEEVLGISAPRIGAMLAKEW 202

Query: 199 RLPEHVTDAI 208
           + P  + DAI
Sbjct: 203 KFPSEMVDAI 212