Pairwise Alignments

Query, 288 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 415 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 75.1 bits (183), Expect = 2e-18
 Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 8/167 (4%)

Query: 44  ARLISQDPGLSGALLKIVNSSYFGLSNKIASIQRAVNLLGSRSIINLINAL----SIKGE 99
           A +IS DP L+  LL+  NS+YFGL + + +I RAV ++G   ++ +        S +G 
Sbjct: 176 AEIISYDPDLASRLLRFANSAYFGLRSPVDNINRAVIVIGVAQLMVIATGTCLIRSFRGI 235

Query: 100 MSDDTIVTLNRFWDTAQDVAMTCLTLAKRTGAQAVDEAYALGLFHDCGVPLMLKRFPNYM 159
            S   +V +  FW  +    +    LA   G +A D  +  GL HD G  +     P++ 
Sbjct: 236 PS--RMVDMRTFWQHSVACGVAARILAVHAGLEATDRLFLSGLLHDIGRLVTFIHLPDHA 293

Query: 160 SVLEQAYANAGPDSRVVDTENNAFNTNHAVVGYYTAKSWRLPEHVTD 206
           + L Q  A      R+VD E      +H  +G      W  P ++ D
Sbjct: 294 ACLLQEAARR--QVRLVDIEEEIVGADHGEIGAALLTHWNCPPYLVD 338