Pairwise Alignments

Query, 181 a.a., twin-arginine translocation pathway signal protein from Pseudomonas simiae WCS417

Subject, 168 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 45.4 bits (106), Expect = 5e-10
 Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 19/167 (11%)

Query: 21  LCASAFLATAGLGASLTGCSSSTPASGFVMLRSSDLPFLRAVI-PVLLEG----VASAQA 75
           L A A  A   LG +L     S P  G       D   L +V+ PV+L+G    VA+ +A
Sbjct: 8   LGAFAGTAAIALGVNLYSPEFSLPDEG----EGKDYRLLFSVLLPVMLDGALPDVATHKA 63

Query: 76  VASGIEGTLKKLDFSLQHL----SPEMFKLTQQLFDVLGMAITRGPLTGIWGSWENASSE 131
            A     TL  +  S+  L      E+F+L   L + LG+ +    +T +       S  
Sbjct: 64  AAQN--RTLDAIKQSIAVLPDEQQAELFELLDMLENRLGLLLLTSSMTPLL----MRSPA 117

Query: 132 QIRNFLHRWENSYLNLLRMGQGSLLKLVIMAWYFQPTSWAHCGYPGP 178
           ++   L  W +SY  LL+     L +LV+ ++Y  P  W+   Y  P
Sbjct: 118 ELTQMLESWRHSYFTLLQTAYLGLRELVMASYYACPEHWSRLHYAKP 164