Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 461 a.a., high-affinity branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  318 bits (815), Expect = 2e-91
 Identities = 193/427 (45%), Positives = 253/427 (59%), Gaps = 35/427 (8%)

Query: 11  KSVVDTVLAGLISLVVFGPIVGVVLDGYSFN-----LEPARVALLVAIVMVGRFAMSLFL 65
           +++ + V AGLI+L +F   VG+  D    N          +A  VAI MVGRF M  ++
Sbjct: 18  RALREAVFAGLITLGMFVLFVGLKTDQNIRNELILTQRWGLLATFVAIAMVGRFLMVAYV 77

Query: 66  QTPKGVKILQGFESTGSGVHVLAPDYKSRLRWIIPALIVIAIVFPIFAN--------KYL 117
           Q     ++ Q   +  +   V+  +      W   A+I++ I  P+           K++
Sbjct: 78  QP----RLAQRKAAKAAAPDVVKEETFFSRNWSKIAVILLLIYPPVIVALVGVQGSLKWV 133

Query: 118 LTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWTVLPLA 177
               I  LIYV+L  GLNIVVGLAGLLDLGYVAFYA+GAY  AL   Y GL FW +LP+A
Sbjct: 134 DNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFYAVGAYSYALLSSYFGLSFWVLLPIA 193

Query: 178 AIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMP-VPSPTFL 236
            + AA  G +LGFPVLR+ GDYLAIVTL FGEIIRLVL NW   T G  G+  +   T  
Sbjct: 194 GLLAACWGVVLGFPVLRLRGDYLAIVTLAFGEIIRLVLINWTEVTKGTFGVSGIAKATLF 253

Query: 237 GLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLAVLYIKHRLTRMPVGRAWE 296
           G++F    KDG   F    G+  +     +F++ ++  + L   ++  RL RMP+GRAWE
Sbjct: 254 GIKF-DATKDG---FAAMMGLPMSSAYYKIFLFYLILGLALLTAFVTIRLRRMPIGRAWE 309

Query: 297 ALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTFFESALILA 356
           ALREDEIACRS+G+N V  KL+AF  GA   G AG FFA  QGFV+P SF F ESA+ILA
Sbjct: 310 ALREDEIACRSLGINTVTTKLTAFATGAMFGGFAGSFFAVRQGFVSPESFVFLESAVILA 369

Query: 357 IVVLGGMGSTVGVVIAAFVLTVAPELLRSFS-------------EYRVLLFGVLMVVMMI 403
           IVVLGGMGS  G+ IAA V+    E+LR  +              YR+L+FG+ MVV+M+
Sbjct: 370 IVVLGGMGSLTGIAIAAVVMIGGTEILRELTFLKMIFGPTFTPELYRMLIFGLAMVVVMV 429

Query: 404 WRPRGLI 410
           W+PRG +
Sbjct: 430 WKPRGFV 436