Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 334 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  130 bits (326), Expect = 8e-35
 Identities = 102/345 (29%), Positives = 161/345 (46%), Gaps = 65/345 (18%)

Query: 110 PIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY-------GLALG 162
           P+  + Y   ++I+G I V+L   + +  G  G+  LG V F AIGAY        +A  
Sbjct: 23  PMVVSDYGQRLLIMGCISVILVASMGLANGFTGVFSLGQVGFVAIGAYVSGILSLSVADK 82

Query: 163 YQYL--------GLGFWTVLPLAAIAAALAGC--ILGFPVLRMHGDYLAIVTLGFGEIIR 212
             YL        G+   TV       A  AG   I+G P++R+ G ++++ T+GF  I+ 
Sbjct: 83  AAYLPDLPAFLAGVQMGTVPATLLAGAVCAGVAVIVGLPLMRLSGHHVSVATMGFMIIVN 142

Query: 213 LVLNNWLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVL 272
            V+ N  SFT G                             F G+  +  +    I++V+
Sbjct: 143 SVIVNAESFTRGAR--------------------------TFTGVPTDITLPVALIWMVI 176

Query: 273 FLVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGV 332
            L +L       RL   P+G A  ++RED IA +++GL+ +  +L AFT+GA  AG+ G 
Sbjct: 177 TLALLG------RLIYSPIGLALRSVREDTIAAQAVGLSVLKTRLLAFTVGAFFAGVGGS 230

Query: 333 FFASYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRS------- 385
            +  Y G  +  +F F     ++ ++VLGGMGS  G V+   V+T   E+LR+       
Sbjct: 231 LYGHYLGSFSAQTFFFPLMVSLIIMLVLGGMGSLSGAVVGVVVVTALSEILRNLERGMDL 290

Query: 386 --------FSEYRVLLFGVLMVVMMIWRPRGLIRISRTGVTPRKG 422
                   F   +V+L G+L +++MI+RPRGL+         RKG
Sbjct: 291 GFVVVPPLFGASQVVL-GLLFILVMIYRPRGLLEDRELTSFGRKG 334