Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 373 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  134 bits (336), Expect = 6e-36
 Identities = 91/321 (28%), Positives = 146/321 (45%), Gaps = 41/321 (12%)

Query: 108 VFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLG 167
           V  +FA+ Y L++ I    Y +  LGLNI+VG  G + LG+ AF+ +GA+  A     +G
Sbjct: 57  VLRLFADGYALSLGIQVCYYAIAALGLNILVGFTGQISLGHAAFFGVGAFSSAWLNTRVG 116

Query: 168 LGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNG 227
           L     +PLA + +A AG + G P  R+ G YLAI TL    II  +      FTGG +G
Sbjct: 117 LPVLVCIPLAGLMSAAAGLLFGAPAARIKGLYLAIATLAAQFIIEDLFVRMDWFTGGSSG 176

Query: 228 MPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLAVLYIKHRLT 287
               +P      F   A+                     F+  + F +VL V+     L 
Sbjct: 177 AMADTPMLGSFAFDNDAR--------------------YFLLSLSFTIVLFVM--AANLM 214

Query: 288 RMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSFT 347
           R   GRA+ ALR+  ++   MG+     ++ +F I A  AG+ G  +  Y  FV+  +FT
Sbjct: 215 RSRDGRAFVALRDHYLSAEVMGIALTRYRVMSFGIAAFYAGIGGALYGHYLMFVSAEAFT 274

Query: 348 FFESALILAIVVLGGMGSTVGVVIAAFVLTVAPE-------------------LLRSFSE 388
              S   L ++++GG+GS +G ++    +   PE                   ++     
Sbjct: 275 ILLSIQFLGMIIIGGLGSVMGAMLGTIFMVALPEVMGAVIAALQTTQWGNRPAVINGLPF 334

Query: 389 YRVLLFGVLMVVMMIWRPRGL 409
           +R +  G  +++ +I+ P GL
Sbjct: 335 FREMAIGAAIILFLIFEPDGL 355