Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 295 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  141 bits (356), Expect = 2e-38
 Identities = 103/313 (32%), Positives = 155/313 (49%), Gaps = 45/313 (14%)

Query: 116 YLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWTVLP 175
           YLL V ++ LIY L+ LGLN+  G  GL++ G V F+AIGAY  AL    L +  W +L 
Sbjct: 4   YLLAVTVIALIYSLMTLGLNLQYGFTGLINFGVVGFFAIGAYTSAL----LVVAGWPIL- 58

Query: 176 LAAIAAALAGCILGFPV----LRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMP-V 230
           LA   A  A  ++ +PV    LR+  +Y AIV LGF E IRLV+ +    TGG  G+  +
Sbjct: 59  LALPCAVAASALVSWPVALLSLRLRIEYFAIVMLGFAETIRLVVTSEGWLTGGVQGVTGI 118

Query: 231 PS-PTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLAVLYIKHRLTRM 289
           PS    LGL                           L   +V    V+ V+++  RL   
Sbjct: 119 PSLAAALGLSMEST----------------------LLTALVALGAVIGVVWLSRRLVAS 156

Query: 290 PVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTFF 349
           P GR   A+R+DE A +++G      K++ F +G+++AGLAG  +A Y  +++P  F   
Sbjct: 157 PFGRIIRAIRDDEDAVQALGKAPGRFKVAVFVLGSASAGLAGALYAHYITYISPDQFMSL 216

Query: 350 ESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLR------------SFSEYRVLLFGVL 397
            +  I   ++LGG+G   G V+   VL    E  R              +  R+ + G+ 
Sbjct: 217 LTFYIWVAMILGGVGRVGGAVLGTAVLIGLMEGSRFLRDILPGVAEVEMASIRLGVIGLA 276

Query: 398 MVVMMIWRPRGLI 410
           ++V+M +RP GL+
Sbjct: 277 LMVLMRFRPEGLL 289