Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 381 a.a., branched-chain amino acid ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  161 bits (407), Expect = 4e-44
 Identities = 99/283 (34%), Positives = 149/283 (52%), Gaps = 25/283 (8%)

Query: 102 LIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLAL 161
           L+   IV P     Y L+ ++  LIY ++G+ +N++ G AG + +G+ AF AIGAY  A+
Sbjct: 28  LVAALIVAPYVLESYYLSQLVFVLIYAIVGIAMNVLSGQAGQVSIGHAAFMAIGAYSAAV 87

Query: 162 GYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSF 221
             +Y GL     L LA     L G ++G P LR+HG YLAI TL F  I+  ++  W S 
Sbjct: 88  AEKY-GLPLPVYLVLAGGFTGLIGYLVGLPALRLHGIYLAIATLAFAFIVEEIVTRWESV 146

Query: 222 TGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLAVLY 281
           T G  G+ + +P+  GL+ G +                       F Y+ L + V+ +L 
Sbjct: 147 TNGNEGLMLGAPSLFGLKLGAQG----------------------FYYLCLGVTVVVILA 184

Query: 282 IKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFV 341
             + L R P GRA+ A+R+ E A RSMG++    K  AF I A+  GLAGV +A    F+
Sbjct: 185 AINIL-RSPTGRAFLAIRDSETAARSMGIDTARYKTRAFAISAAFTGLAGVLYAHKLSFI 243

Query: 342 NPSSFTFFESALILAIVVLGGMGSTVGVVIAA-FVLTVAPELL 383
           +P  F+   S   + I+++GG+ S  G V  A F++ V P L+
Sbjct: 244 SPEMFSLSMSIEFVMIIIIGGVLSLRGAVFGAIFMIMVDPILI 286