Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 287 a.a., ABC-type branched-chain amino acid transport system, permease component from Dechlorosoma suillum PS

 Score =  165 bits (418), Expect = 1e-45
 Identities = 111/301 (36%), Positives = 163/301 (54%), Gaps = 35/301 (11%)

Query: 109 FPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGL 168
           F  F + Y   V  +G ++ LL L + + +   GLL L   AF  +GAY  AL   +L  
Sbjct: 4   FNDFWSTYSTLVFSVG-VHALLALSIWLTLS-CGLLSLANAAFMGVGAYVSALLTLHLEW 61

Query: 169 GFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGM 228
            F +VL    IA  L   I+G PVLR+ G YLA+ TL FGE++R+ + N L  TGGP G+
Sbjct: 62  SFGSVLLAGGIAPTLVALIIGAPVLRLSGVYLAMATLAFGEVVRITVLN-LEITGGPEGL 120

Query: 229 PVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLAVLYIKHRLTR 288
                              GIP            +     +I L L V   +Y   RL R
Sbjct: 121 ------------------NGIP------------LATEGWHIALILAV--AVYGLARLRR 148

Query: 289 MPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTF 348
             VGRA+EA++EDE+A R MG+N    KL AF++GA  AG+AG   A +  F++P  + F
Sbjct: 149 SKVGRAFEAIKEDEVAARLMGINVDRYKLLAFSLGAFIAGVAGALNAHFTFFISPREYGF 208

Query: 349 FESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMVVMMIWRPRG 408
             +  IL + VLGG  S +G ++ + +LT+ PELLRS  ++R L+ G ++V+++++ P+G
Sbjct: 209 ENAVDILTMAVLGGTSSLIGPMLGSSILTLLPELLRSLQDFRSLVNGAVLVLVVLFLPKG 268

Query: 409 L 409
           L
Sbjct: 269 L 269