Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 355 a.a., ABC-type branched-chain amino acid transport system, permease component from Dechlorosoma suillum PS

 Score =  134 bits (338), Expect = 3e-36
 Identities = 98/337 (29%), Positives = 160/337 (47%), Gaps = 47/337 (13%)

Query: 102 LIVIAIVFPIFANKYLLTVVILG-LIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLA 160
           L+V A+V P+ A++Y +  +++  LI+ L  LGLNI+ G AG L LG  AF A+GA+   
Sbjct: 33  LVVAALVVPMVASEYWIKAILIPFLIFSLAALGLNILTGYAGQLSLGSAAFMAVGAFA-- 90

Query: 161 LGYQYLGL--GFWTVLPLAA--IAAALAGCILGFPVLRMHGDYLAIVTLG--FGEIIRLV 214
             Y ++G   G   +L      ++AA  G + G P LR+ G YLA+ TL   F  +  L 
Sbjct: 91  -AYNFMGRIEGMPVLLAFVGGGLSAAAVGILFGLPSLRIKGFYLAVATLAAQFFIVWALT 149

Query: 215 LNNWLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFL 274
              W S       +       LG  F                         + +Y+++  
Sbjct: 150 KFGWFSMDSSSGVITAQEIQILGYRFDTP----------------------ISLYLLVLT 187

Query: 275 VVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFF 334
           +V  +      + R  VGRAW A+R+ ++A   +G+  +  KL AF I +   G+AG  +
Sbjct: 188 IVAVMALAAKNMVRSSVGRAWMAVRDMDVAAEVIGIRIMHTKLLAFAISSFYCGVAGALY 247

Query: 335 A-SYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAP----ELLRSF--- 386
           A +Y G V P  F    S  IL ++++GG+GS +G  + A  + + P     L++ F   
Sbjct: 248 AYAYLGTVEPEGFNLDLSFKILFMIIIGGVGSIMGSFLGAAFIVLLPIFLDVLIQDFLTG 307

Query: 387 -------SEYRVLLFGVLMVVMMIWRPRGLIRISRTG 416
                  S  ++++FG L++  +I  P GL R+ + G
Sbjct: 308 LLPPSISSNLQLMVFGGLIIFFLIVEPHGLARLWQIG 344