Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 358 a.a., ABC-type branched-chain amino acid transport system, permease component from Dechlorosoma suillum PS

 Score =  238 bits (607), Expect = 2e-67
 Identities = 139/336 (41%), Positives = 199/336 (59%), Gaps = 38/336 (11%)

Query: 101 ALIVIAIVFPIFANKYL----LTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGA 156
           A+ ++  V P      L    L ++   ++Y++L LGLNIVVG AGLLDLGY+AFYA+GA
Sbjct: 19  AIGIVLAVLPFLVGAGLGNAWLRILNFAMLYIMLALGLNIVVGFAGLLDLGYIAFYAVGA 78

Query: 157 YGLAL-GYQYLGLGF--WTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRL 213
           Y  AL    + GL +  W +LPL A+ A  AG +LG P LR+ GDYLAIVTLGFGEIIR+
Sbjct: 79  YLYALLASPHFGLHWPVWAILPLGAVVAGGAGALLGAPTLRLRGDYLAIVTLGFGEIIRI 138

Query: 214 VLNNW---LSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYI 270
            +NN    ++ T GP G+    P  +G          G+   +   +     +  L  Y 
Sbjct: 139 FMNNLNAPVNITNGPQGISSIDPFHVG----------GVTLAKPLSV-LGVTVPSLHAYY 187

Query: 271 VLFLVV-LAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGL 329
            LFL++ L ++++  RL    +GRAW A+REDEIA ++ G+N   +KL AF++GA+  G+
Sbjct: 188 YLFLLLALVIIFVTIRLEDSRIGRAWVAIREDEIAAKACGINVRNIKLLAFSMGATFGGV 247

Query: 330 AGVFFASYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFS-- 387
           AG  FAS+QGFV+P SF   ES ++L +VVLGGMG   GV++   +LT+ PE  R  +  
Sbjct: 248 AGGLFASFQGFVSPESFGLMESIMVLCMVVLGGMGHIPGVILGGILLTILPEAFRHAAVP 307

Query: 388 --------------EYRVLLFGVLMVVMMIWRPRGL 409
                           R+LLFG+ ++ +M++RP GL
Sbjct: 308 LQKYAFGKVVVDPESLRMLLFGLALIAVMLYRPAGL 343