Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 360 a.a., inner-membrane translocator (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  171 bits (432), Expect = 4e-47
 Identities = 104/330 (31%), Positives = 171/330 (51%), Gaps = 24/330 (7%)

Query: 82  SGVHVL--APDYKSRLRWIIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVG 139
           +G H L  AP  +    W+  A + +A++     + Y  TV+ +  + +++  GLN+++G
Sbjct: 22  TGRHPLFTAPARRFMRGWLAVA-VAVALLPLALRSGYQFTVLNVVAVNLIVVTGLNLLMG 80

Query: 140 LAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDY 199
            AG +  G+ AF+ +GAYG A+     G+  W  + ++A   A+A  ++G P LR+ G+Y
Sbjct: 81  YAGQISYGHAAFFGMGAYGSAILSATHGVDPWLAMGVSACGVAVAAAVVGVPTLRLKGNY 140

Query: 200 LAIVTLGFGEIIRLVLNNWLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDY 259
           L + TLGF  I+ ++L  W   TGG +G                    G+P     GI +
Sbjct: 141 LVMATLGFNLIVDVILVQWSEVTGGSSGFV------------------GVPPLAVAGISF 182

Query: 260 NPNIKFLFIYIVLFLVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSA 319
           + +  F   Y + + V L +L     L   PVGRA  A+ + E    + G+     K+  
Sbjct: 183 DTDRSF---YWLAWGVALLLLIPARNLVHSPVGRALRAIHDSEPGAEACGVPTASYKVQV 239

Query: 320 FTIGASTAGLAGVFFASYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVA 379
           F + A  A LAG   A Y G V P +F  F+S   + + ++GGMGS  G +  A +LTV 
Sbjct: 240 FVLSAVFASLAGSLHAHYLGIVAPKTFDIFKSVEFVTMCLIGGMGSLWGGLAGALLLTVL 299

Query: 380 PELLRSFSEYRVLLFGVLMVVMMIWRPRGL 409
           P++L  F E+  L+FG +++VM+I+ PRG+
Sbjct: 300 PQMLGVFEEHHDLIFGAILLVMLIFMPRGV 329