Pairwise Alignments

Query, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 368 a.a., ABC transporter from Klebsiella michiganensis M5al

 Score =  234 bits (598), Expect = 2e-66
 Identities = 149/354 (42%), Positives = 209/354 (59%), Gaps = 49/354 (13%)

Query: 93  SRLRWIIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFY 152
           S +  ++ AL+V  +V       Y + V+   L+YV+L LGLNIVVG  GLLD+G++AFY
Sbjct: 17  SGMTLLVCALLVAPMVASQLGGNYWVRVIDFALLYVMLALGLNIVVGYTGLLDMGFIAFY 76

Query: 153 AIGAYGLAL--------GYQYLGLGF-------WTVL-PLAAIAAALAGCILGFPVLRMH 196
           A+GAY  AL         +  L   F       W V+ PLAA+ AA  G +LG P L++ 
Sbjct: 77  AVGAYLAALLASPHLLDVFPILNSWFPDGLHTSWLVIIPLAALVAAGCGIVLGAPTLKLR 136

Query: 197 GDYLAIVTLGFGEIIRLVLNNW---LSFTGGPNGMP-VPSPTFLGLEFGKRAKDGGIPFH 252
           GDYLAIVTLGFGEIIR+++ N    ++ T G  G+  V S    GL+F       G+  +
Sbjct: 137 GDYLAIVTLGFGEIIRILMRNLDRPVNITNGAKGISGVDSLNLFGLKFS------GV--Y 188

Query: 253 EFFGIDYNPNIKFLFI-YIVLFLVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLN 311
            +FG      +  L++ Y +L LV++A++++  RL    +GRAW A+REDE   R+MG+N
Sbjct: 189 HWFGF----KVPALWLWYYLLMLVIVAIIFVCLRLQHSRIGRAWHAIREDEDVARAMGIN 244

Query: 312 HVLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVI 371
               KL AF IGAS  G+AG  F ++QGFV+P SFT  ES  +LA+VVLGGMG   GV++
Sbjct: 245 LRNYKLLAFAIGASFGGVAGALFGAFQGFVSPESFTLQESIAVLAMVVLGGMGHIPGVIL 304

Query: 372 AAFVLTVAPELLRS---------FSE-------YRVLLFGVLMVVMMIWRPRGL 409
            A +LT  PELLRS         F E        R L +G+ +V++M+ RP+G+
Sbjct: 305 GAVLLTALPELLRSQAAPVQQALFGEVLIDPEVLRQLFYGLALVLVMLLRPQGI 358