Pairwise Alignments

Query, 196 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 185 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score =  134 bits (337), Expect = 1e-36
 Identities = 70/170 (41%), Positives = 111/170 (65%), Gaps = 2/170 (1%)

Query: 10  YVLQTLGSLYLLIVLLRFVLQLVRANFYNPLCQFIVKATQPLLKPLRRVIPSLFGLDMSS 69
           +++ TL  LY+++V+LR  LQ  RA+FYNP  QFIVKATQP++ PLRRVIPS+  +D+++
Sbjct: 6   FLINTLFDLYIMVVILRIWLQAARADFYNPFSQFIVKATQPVVGPLRRVIPSIGSIDLAT 65

Query: 70  LVLA-ILVQLALMALTLLLTYGTTGNFLQLLVWAIIGVTALFLKIFFFALIISVILSWVA 128
           +V A +L  L  MAL L+ + G+       L   ++ +      + F+ L+I  ILSWV+
Sbjct: 66  IVFAYVLCVLKFMALVLIASSGSVSFSADFLFLGLLSLIKAAGGLLFWVLLIRAILSWVS 125

Query: 129 PGSHNPGAELVNQICEPALAPFRRLLPNLGGLDISPILAFMVLKLLDMLV 178
            G  +P   + +Q+ EP LAP RR++P +GG D+S ++ F+VL+  + L+
Sbjct: 126 QG-RSPIEYVFHQLTEPMLAPIRRIIPVMGGFDLSVLVLFIVLQFANFLM 174



 Score = 39.7 bits (91), Expect = 3e-08
 Identities = 16/72 (22%), Positives = 41/72 (56%)

Query: 113 IFFFALIISVILSWVAPGSHNPGAELVNQICEPALAPFRRLLPNLGGLDISPILAFMVLK 172
           ++   +I+ + L       +NP ++ + +  +P + P RR++P++G +D++ I+   VL 
Sbjct: 14  LYIMVVILRIWLQAARADFYNPFSQFIVKATQPVVGPLRRVIPSIGSIDLATIVFAYVLC 73

Query: 173 LLDMLVINNLAA 184
           +L  + +  +A+
Sbjct: 74  VLKFMALVLIAS 85