Pairwise Alignments

Query, 344 a.a., twitching motility protein PilT from Pseudomonas simiae WCS417

Subject, 340 a.a., type IV pilus twitching motility protein PilT from Rahnella sp. WP5

 Score =  296 bits (759), Expect = 4e-85
 Identities = 165/338 (48%), Positives = 219/338 (64%), Gaps = 6/338 (1%)

Query: 1   MDITELLTASVHRGASDLHLSAGLAPMLRVDGEVWPLEG-PVLSPPQVADLLSPLLNQHQ 59
           MDI  L+  SV + ASDLHL  G  P+LR+DGE+   E  PV+   Q+  L+   L+  +
Sbjct: 1   MDIDGLVGRSVKQNASDLHLCTGYPPVLRIDGELCRCEDLPVVEASQMLGLIHGWLDATE 60

Query: 60  QKDFETSLETDFAFELPDVARFRANVFRQDRGLSAVFRTIPSEVRSLESLGLGEVFQRIA 119
           Q   + + + D A  L D  R R N+F+Q  GLSA  R +P+    L +L + ++ Q + 
Sbjct: 61  QHTLQLAGQVDKALTLGDGVRMRLNIFQQLHGLSAALRPVPARCPELAALRVPDILQHVI 120

Query: 120 QLPRGLVLVTGPTGSGKSTTLAAMIDFLNQHRRHHILTLEDPIEFIHTPKMALINQRQVH 179
               GL+LVTG TGSGKSTTLAA+ID LN+H + HI+TLEDPIE IHT +  LI QR++ 
Sbjct: 121 MQEDGLILVTGATGSGKSTTLAALIDHLNRHAKRHIITLEDPIELIHTGRQCLIQQRELG 180

Query: 180 RDTHGFSVALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDR 239
             T  F  A+R ALREDPDV+L+GELRD ++IRLALTAAETGHLV  TLHT +A + +DR
Sbjct: 181 LHTRSFGEAVRGALREDPDVLLLGELRDTDSIRLALTAAETGHLVLATLHTRNATQAIDR 240

Query: 240 LVDVFPAGEKAMVRSMLSESLQAVVSQVLV---KKIG--GGRVAAHEIMLGTPAIRNLIR 294
           LVDVFPA EK  VR+ L+ SL+AV++Q L    +K G   GRVA  E++  TPA+ NLIR
Sbjct: 241 LVDVFPAEEKVFVRAQLAGSLRAVIAQKLAVTEEKDGRKAGRVALFEVLTSTPAVCNLIR 300

Query: 295 EDKVAQMVSAIQTGGALGMKTLDMSLKVLVGEGLVSRE 332
           E K  Q+   +QTG   GM+T   S +     GL++ +
Sbjct: 301 EGKTHQLADILQTGAQAGMQTFAQSRQQRQRAGLLAED 338