Pairwise Alignments

Query, 378 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 375 a.a., ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  269 bits (687), Expect = 1e-76
 Identities = 143/355 (40%), Positives = 214/355 (60%), Gaps = 5/355 (1%)

Query: 12  ALAVAAALGVSTFVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADVINKAGGINGEKIV 71
           A  V A +   +F    +KIG+AGP TG  A +G+    G++ A + IN  GG+NG+++V
Sbjct: 13  AAMVLAGVASHSFAADTIKIGIAGPKTGPVAQYGDMQFSGSKMAIEQINAKGGVNGKQLV 72

Query: 72  LVAGDDACEPKQAVAVANRLADQDKVIGVVGHFCSSNTIPASEVYDEAGIIAITPGSTNP 131
            V  DDAC+PKQAVAVAN++ + D +  VVGH CSS+T PAS++Y++ G++ ITP +T+P
Sbjct: 73  AVEYDDACDPKQAVAVANKVVN-DGIKFVVGHLCSSSTQPASDIYEDEGVVMITPAATSP 131

Query: 132 QVTERGLGAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVINDKDTYGKGLADATAAQLTK 191
            +T RG   +FR  G D  QG  AG+YI D +K K VAV++DK  YG+G+A A    L  
Sbjct: 132 DITARGYKMIFRTIGLDSAQGPAAGNYIADHVKPKIVAVLHDKQQYGEGIASAVKKTLED 191

Query: 192 RGVKPVLEEGLTRGEKDFSALVTKIRSTGADVVYFGGLHPEAGPLVRQIREAGLKDVKFM 251
           +GVK  + EG+  G+KDFS+++ K++    D VY+GG HPE G ++RQ +E GLK  KFM
Sbjct: 192 KGVKVAVFEGVNAGDKDFSSMIAKLKQANVDFVYYGGYHPELGLILRQSQEKGLK-AKFM 250

Query: 252 SDDGVVTDELVATAGGAQYVDGVYMTFGADPRLLPDSKAVVEEFRKNGTEPEG-YTLYAY 310
             +GV  D +   A   +  +G+ +T        P + A+ + F+    +P G +   +Y
Sbjct: 251 GPEGVGNDSISQIA--KESSEGLLVTLPKSFDQDPANIALADAFKAKKEDPSGPFVFPSY 308

Query: 311 ASVQALAAGFNGAKSNKGEDAAKWLKAHPVKTVMGEKAWDSKGDLKISDYVVYQW 365
           ++V  +A     AKS      A+ + A   KT  G+ ++D  GDLK   +VVY+W
Sbjct: 309 SAVTVIADAIKAAKSEDAGKVAEAIHAGTFKTPTGDLSFDKNGDLKDFKFVVYEW 363