Pairwise Alignments

Query, 174 a.a., protein PilI from Pseudomonas simiae WCS417

Subject, 164 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 56.6 bits (135), Expect = 2e-13
 Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 10/135 (7%)

Query: 19  RLLAADLPSQETRLQRWSGIGFRLGQHWYVAPMGEVAEVLHEPRCTLMPGVKAWVKGVAN 78
           R +AA   S++  + +W  + F+L    Y   + +V EVL       +PG   +V G+ N
Sbjct: 5   RNVAAVAASKDDAVLQW--VTFKLDNETYGINVMQVQEVLRYTEIAPVPGAPHYVLGIIN 62

Query: 79  LRGRLLPVMDLGGFLGLELSKAGKQRRVLVVEYNDLFVGLLVDEVMGMQHFAQDAWLAND 138
           LRG ++ V+D     GL+ ++     R++++E     +G+LVD V  + +  +     ++
Sbjct: 63  LRGNVVTVIDTRSRFGLQSAEVDDSTRIVIIEAEKQVIGILVDSVAEVVYLRRSE--IDN 120

Query: 139 AP------AAPFIQG 147
           AP      +A FIQG
Sbjct: 121 APNVGTEESAKFIQG 135