Pairwise Alignments

Query, 1934 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 754 a.a., Sensor histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  341 bits (874), Expect = 2e-97
 Identities = 244/766 (31%), Positives = 392/766 (51%), Gaps = 37/766 (4%)

Query: 1175 PASGADPELLDIFLEEAADILDSSSAALSRWQAEPGNRQEVETLLRDLHTLKGGARMVEI 1234
            P    D  LL++F  EA   +   SA L   + +P     +E+ +R  H+LKG AR+V +
Sbjct: 3    PDQMRDASLLELFSLEAEAQVQVLSAGLLALERDPTQADYLESCMRAAHSLKGAARIVGV 62

Query: 1235 APIGDLAHELE-FLYEGLSAGLLAPSPELFALLQGCHDRLAQMIDAVADGLPVGSVDKLI 1293
                 +AH +E  L       L+  +  + ALLQG    L   I    + +    +D  +
Sbjct: 63   DAGVSVAHVMEDCLVSAQEQRLVLGAEHIDALLQGTD--LLMRIATPGNSVGAPDIDAYV 120

Query: 1294 ERIKTLVHPSDEPVTPVALPAGKAEAVVDPMADMVKISAELLDDLVNLAGETSIFRGRIE 1353
              +  L+ P+      V LP+   E  V+P+        EL D     A E +  R R+ 
Sbjct: 121  ALMGRLLDPNAPQAPAVVLPS--VETAVEPLR------IELPDVEPPPATEPAPQRKRVT 172

Query: 1354 QQVNDARIALTEVETTIERMRDQLRRLDTETQG--------RILSRQQAEAERLGYEDFD 1405
            +     R+     E  +  + D   +   ETQ         + L RQQ+   R   E+ +
Sbjct: 173  E--GGERVLRVTAER-LNSLLDLSSKSLVETQRLKPWLATMQRLKRQQSTGLR-ALEELN 228

Query: 1406 PLEMDRHSQLQQLSRALSESASDLLDLKDTLERRNEDAHDLLQQQARINTELQEGLMRTR 1465
             + +  H+   Q   AL ++   L + +  L ++  +  +   Q ++    L +  +  R
Sbjct: 229  -VHLKDHALSLQAQEALGDARRLLAETQQLLAQKTAELDEFAWQASQRAQVLYDTALACR 287

Query: 1466 MVPFERMLPRLKRIVRQVAEELGKDVEFIVGNAEGEMDRNVLERMAAPLEHMLRNAVDHG 1525
            M PF  +L    R+VR +   L K V   +   + ++DR+VLE++ APL H+LRNAVDHG
Sbjct: 288  MRPFADVLSGQARMVRDLGRSLDKQVRLEIEGEKTQVDRDVLEKLEAPLTHLLRNAVDHG 347

Query: 1526 LESRDARLLAGKPEKGRITLDLTHEGGDIVFDMRDDGAGVPLEAVRRKAIKRGLLDPNQ- 1584
            +E  + R+LAGKP +G I L  +H+ G +V ++ DDGAGV LE VRR  ++RG L P Q 
Sbjct: 348  IEPPEQRILAGKPAEGVIRLRASHQAGLLVLELADDGAGVDLERVRRSIVERG-LSPEQT 406

Query: 1585 --DISDRDVLQFILQPGFSTAEKITQISGRGVGMDVVHEEVRQLGGSMVIDSTPGEGVHF 1642
               +S+ ++L F+  PGFS  +K+T++SGRGVG+D V   VRQL G++V++ T GEG  F
Sbjct: 407  AASLSEEELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHMVRQLRGAVVLEQTAGEGSRF 466

Query: 1643 RIRLPFTVSVNRALMVQCADDQYAIPLNTIEGLVRVLPHELAGHYQQDPPRYEYAGQRYE 1702
             + +P T+SV R+L+V+  D+ YA PL  IE +  + P ++     +    + + G+   
Sbjct: 467  HLEVPLTLSVVRSLVVEVGDEAYAFPLAHIERMCDLAPEDIV--QVEGRQHFWHEGRHIG 524

Query: 1703 LFYLGDLLHTVSRPKLLGHYQPVPVLLVQCNERRVAIHVDAMAGTREIVVKGLGPQFAGV 1762
            L     LL   +RP   G  Q + V++++  E    + V+   G R +VV  L  +   V
Sbjct: 525  LVAASQLL---NRPATQGSNQTLKVVVIRERETIYGVAVERFIGERTLVVLPLDERLGKV 581

Query: 1763 QGLSGATILGDGRVVLIIDLLAHIRARQPALPAQTADLPLILNDPLKKRP-LLVLVVDDS 1821
            Q +S   +L DG VVLI+D+   +R+    L   T  L  I      + P   +LVVDDS
Sbjct: 582  QDISAGALLDDGSVVLIVDVEDLLRSVDKLL--DTGRLERIARQNQAQAPRKRILVVDDS 639

Query: 1822 VTVRKVTSRLLERNGMNVLTAKDGIDALAVLEEHTPDLMLLDIEMPRMDGFEVATQVRND 1881
            +TVR++  +LL   G +V  A DG+D    L     DL++ DI+MPRMDG E+ + +R D
Sbjct: 640  LTVRELQRKLLLNRGYDVAVAVDGMDGWNALRSEDFDLLITDIDMPRMDGIELVSLLRRD 699

Query: 1882 PRLMRLPIIMITSRTGQKHRDRAMAIGVNDYLGK-PYQESVLLESI 1926
             RL  LP+++++ +  ++ R R +  G + YL K  + +  LL+++
Sbjct: 700  NRLQSLPVMVVSYKDREEDRRRGLDAGADYYLAKASFHDDALLDAV 745



 Score = 45.4 bits (106), Expect = 3e-08
 Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 7/175 (4%)

Query: 1041 RDDEIVEIFLEEA---VDILDSAGQSLKRWLLEPDNAAPLSSLQRDLHTLKGGARMAEIE 1097
            RD  ++E+F  EA   V +L +   +L+R   +P  A  L S  R  H+LKG AR+  ++
Sbjct: 7    RDASLLELFSLEAEAQVQVLSAGLLALER---DPTQADYLESCMRAAHSLKGAARIVGVD 63

Query: 1098 AIGDLAHELECLYEGLVDRRYSYTAELSHVLMASHERLALQLEELHHHQPLSDSAELIAR 1157
            A   +AH +E       ++R    AE    L+   + L +++    +     D    +A 
Sbjct: 64   AGVSVAHVMEDCLVSAQEQRLVLGAEHIDALLQGTD-LLMRIATPGNSVGAPDIDAYVAL 122

Query: 1158 VRALRQGSAPAAPAAAPPASGADPELLDIFLEEAADILDSSSAALSRWQAEPGNR 1212
            +  L   +AP APA   P+     E L I L +      +  A   +   E G R
Sbjct: 123  MGRLLDPNAPQAPAVVLPSVETAVEPLRIELPDVEPPPATEPAPQRKRVTEGGER 177



 Score = 40.8 bits (94), Expect = 7e-07
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 3/97 (3%)

Query: 747 DPMLLEIFRNEAQSHLDSLNHFLHQAAEHVPLQVS--DELQRALHTLKGSAYMAGVLPIA 804
           D  LLE+F  EA++ +  L+  L  A E  P Q    +   RA H+LKG+A + GV    
Sbjct: 8   DASLLELFSLEAEAQVQVLSAGL-LALERDPTQADYLESCMRAAHSLKGAARIVGVDAGV 66

Query: 805 ELARPLDHLTREYKAHRLPLDLDEVELLLEAEGLFQR 841
            +A  ++      +  RL L  + ++ LL+   L  R
Sbjct: 67  SVAHVMEDCLVSAQEQRLVLGAEHIDALLQGTDLLMR 103



 Score = 32.3 bits (72), Expect = 2e-04
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 8/96 (8%)

Query: 617 DDELREVFLEETDEVLEVLHRNL------PNSADKIAQGEMRRAFHTLKGSGRMVRALVL 670
           D  L E+F  E +  ++VL   L      P  AD +      RA H+LKG+ R+V     
Sbjct: 8   DASLLELFSLEAEAQVQVLSAGLLALERDPTQADYLES--CMRAAHSLKGAARIVGVDAG 65

Query: 671 AELAWAVENLLNRVLERSVTLGPDVQQVLDEAVALL 706
             +A  +E+ L    E+ + LG +    L +   LL
Sbjct: 66  VSVAHVMEDCLVSAQEQRLVLGAEHIDALLQGTDLL 101