Pairwise Alignments
Query, 1934 a.a., histidine kinase from Pseudomonas simiae WCS417
Subject, 708 a.a., chemotaxis protein CheA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710
Score = 234 bits (597), Expect = 3e-65
Identities = 133/353 (37%), Positives = 201/353 (56%), Gaps = 18/353 (5%)
Query: 1446 LLQQQARINTELQEGLMRTRMVPFERMLPRLKRIVRQVAEELGKDVEFIVGNAEGEMDRN 1505
L++ R++ +L++ + RM+P R +R+VR +A ELGK VE + E E+D+
Sbjct: 368 LVEALERLSDDLRDTTLGVRMLPIGTTFSRFRRLVRDLAGELGKSVELVTLGGETELDKT 427
Query: 1506 VLERMAAPLEHMLRNAVDHGLESRDARLLAGKPEKGRITLDLTHEGGDIVFDMRDDGAGV 1565
V+ER+ PL H LRN++DHG+ES + RL AGK GRITL H GG+++ + DDGAG+
Sbjct: 428 VIERLGDPLVHCLRNSLDHGVESPERRLAAGKSATGRITLAAAHAGGEVLVTISDDGAGI 487
Query: 1566 PLEAVRRKAIKRGLLDPNQDISDRDVLQFILQPGFSTAEKITQISGRGVGMDVVHEEVRQ 1625
E + + A+++G++ P D+S R L+ I GFSTAEK+T +SGRGVGMDVV +
Sbjct: 488 DAERIYQAALRKGIIAPEVDLSTRQKLELIFAAGFSTAEKVTSVSGRGVGMDVVKRAIES 547
Query: 1626 LGGSMVIDSTPGEGVHFRIRLPFTVSVNRALMVQCADDQYAIPLNTIEGLVRVLPHELAG 1685
L G + ++STPG+G IRLP T+++ L V+ D+ Y IPL +E E A
Sbjct: 548 LRGRIELESTPGKGTVITIRLPLTLAIIDGLQVRVGDESYIIPLPHVE--------ECAE 599
Query: 1686 HYQQDPPRYEYAGQRYELFYLGDLLHTVSRPKLLGHYQPVP----VLLVQCNERRVAIHV 1741
H D G++ + GD++ + + P +++V R + V
Sbjct: 600 HNTPD----HVDGRQRIINLRGDIVPFIRLRDVFRVPGVSPGMEQLVVVNALGSRFGLVV 655
Query: 1742 DAMAGTREIVVKGLGPQFAGVQGLSGATILGDGRVVLIIDL--LAHIRARQPA 1792
D + G + V+K LG + + G+SGATI GDG + LIID+ L H A + A
Sbjct: 656 DCVIGEHQTVIKSLGKVYKDIPGISGATIQGDGSMALIIDVPGLVHTAALEAA 708
Score = 58.5 bits (140), Expect = 3e-12
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 1187 FLEEAADILDSSSAALSRWQAEPGNRQEVETLLRDLHTLKGGARMVEIAPIGDLAHELEF 1246
F+EEA D+L AL + P +R V+ + R +HT+KG M I H++E
Sbjct: 12 FVEEAQDLLAELETALLEIEERPEDRSLVDRIFRAMHTIKGSGAMFGFDDIASFTHDVES 71
Query: 1247 LYEGLSAGLLAPSPELFALLQGCHDRLAQMIDAVADGLPV 1286
+++ + G + SPEL L D +A ++ GL V
Sbjct: 72 VFDKVRNGEMELSPELLDLTLKSRDHIAYLLQCATKGLAV 111
Score = 52.4 bits (124), Expect = 2e-10
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 1047 EIFLEEAVDILDSAGQSLKRWLLEPDNAAPLSSLQRDLHTLKGGARMAEIEAIGDLAHEL 1106
+ F+EEA D+L +L P++ + + + R +HT+KG M + I H++
Sbjct: 10 QAFVEEAQDLLAELETALLEIEERPEDRSLVDRIFRAMHTIKGSGAMFGFDDIASFTHDV 69
Query: 1107 ECLYEGLVDRRYSYTAELSHVLMASHERLA--LQLEELHHHQPLSDSAELIARVRALRQG 1164
E +++ + + + EL + + S + +A LQ +S SA+L +RAL G
Sbjct: 70 ESVFDKVRNGEMELSPELLDLTLKSRDHIAYLLQCATKGLAVDVSMSADLTQALRALLPG 129
Query: 1165 S--APAAPAAAPPASG 1178
A A+PA P+SG
Sbjct: 130 DDHASASPADEMPSSG 145
Score = 43.5 bits (101), Expect = 1e-07
Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 13/143 (9%)
Query: 616 IDDEL-REVFLEETDEVLEVLHRNL----PNSADKIAQGEMRRAFHTLKGSGRMVRALVL 670
+ DEL R+ F+EE ++L L L D+ + RA HT+KGSG M +
Sbjct: 3 VQDELNRQAFVEEAQDLLAELETALLEIEERPEDRSLVDRIFRAMHTIKGSGAMFGFDDI 62
Query: 671 AELAWAVENLLNRVLERSVTLGPDVQQVL----DEAVALLPELIADFAIDDQRQRDEVDA 726
A VE++ ++V + L P++ + D LL A+D D A
Sbjct: 63 ASFTHDVESVFDKVRNGEMELSPELLDLTLKSRDHIAYLLQCATKGLAVDVSMSADLTQA 122
Query: 727 LAARAHALASGMPVPAAEPHDPM 749
L AL G +A P D M
Sbjct: 123 L----RALLPGDDHASASPADEM 141
Score = 32.0 bits (71), Expect = 3e-04
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 747 DPMLLEIFRNEAQSHLDSLNHFLHQAAEHVP-LQVSDELQRALHTLKGSAYMAGVLPIAE 805
D + + F EAQ L L L + E + D + RA+HT+KGS M G IA
Sbjct: 5 DELNRQAFVEEAQDLLAELETALLEIEERPEDRSLVDRIFRAMHTIKGSGAMFGFDDIAS 64
Query: 806 LARPLDHLTREYKAHRLPLDLDEVELLLEA 835
++ + + + + L + ++L L++
Sbjct: 65 FTHDVESVFDKVRNGEMELSPELLDLTLKS 94
Score = 30.0 bits (66), Expect = 0.001
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 18/114 (15%)
Query: 1278 DAVADGLPVGSVDKLIERIKTLVHPSDEPVTPVALPAGKAEAVVDPMADMVKISAELLDD 1337
D VA L + + R +T D+P A AG A A +++SA LD
Sbjct: 292 DQVASALAEQKTVRELRRSRT--EDGDKP----AEKAGDAGA-------SIRVSAAKLDY 338
Query: 1338 LVNLAGETSIFRGRIEQQVND--ARIALTEVETTIERMRDQLRRLDTETQGRIL 1389
LV+L GE I + +I + ++ A L+ VE +ER+ D LR DT R+L
Sbjct: 339 LVDLVGELVIVQSQIARMAHEHPAPGMLSLVE-ALERLSDDLR--DTTLGVRML 389