Pairwise Alignments

Query, 300 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 265 a.a., ABC transporter periplasmic substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 77/275 (28%), Positives = 124/275 (45%), Gaps = 21/275 (7%)

Query: 1   MKKILLTGCTLGLLLGAQAHANQAPLDGTLGKIASAKSITLGYRDASVPFSYVGDNSGKP 60
           +K +LL    L  +    A A+ + LD  + +    K + +G  D SVP   + +   +P
Sbjct: 5   LKSLLLPLVGLLAITVGAATASASSLDDIIAR----KKVMIGV-DLSVPPFGITNEEMQP 59

Query: 61  MGYSVELASKIVERIQQKTGVATLNVKYNLV--TSQTRIPLVQNGTVDLECGSTGVTAER 118
            G  V++A  + +          L V+  LV  T Q+RIP +Q G VD    S G+  ER
Sbjct: 60  DGLDVDVAKLLAK---------DLGVELELVPVTGQSRIPSLQTGKVDFVVASFGIYTER 110

Query: 119 QKQVAFSYGFIYVKGQLLTAKDSGIKGFPDLAGKNVVTTAGTTNERFLKSYNAEHKTNMF 178
              VAFS  +   +  ++  K++ IK   DLAGK V    GT +E+ L + N E    M 
Sbjct: 111 ALSVAFSNPYGGHRSIIIAPKEATIKSLADLAGKRVGVPRGTAHEKILSAANVE---GME 167

Query: 179 VISAKDHGEAFKMLETGRAAAFYMDDALLYGERAKAKDPHNWVVVGEEQSREIYSCMLRK 238
           ++   D       L +G+  A  +        + + + P           +  Y   LR+
Sbjct: 168 LVRFDDDSTTLNALVSGQVDA--IGTVNYIAAQLQERYPDRGFEEKTTYLQSFYGVGLRR 225

Query: 239 DDPQFLAVVNETLGDLYRSGEINGIYQRWFESPIP 273
           +DP  L  +N  L    +SGE+  IY++W ++PIP
Sbjct: 226 NDPDLLHWLNTVLFVHKQSGELGAIYEKWMKTPIP 260