Pairwise Alignments

Query, 300 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 271 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 76.3 bits (186), Expect = 7e-19
 Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 16/246 (6%)

Query: 29  TLGKIASAKSITLGYRDASVPFSYVGDNSGKPMGYSVELASKIVERIQQKTGVATLNVKY 88
           T+  I SA ++ +G      PF  + D + +P GY  ++A  + + +  +  +       
Sbjct: 34  TVETIKSAGTVKVGMLVDFPPFGIM-DANNQPDGYDADVAKLLAKELGVEVTIVP----- 87

Query: 89  NLVTSQTRIPLVQNGTVDLECGSTGVTAERQKQVAFSYGFIYVKGQLLTAKDSGIKGFPD 148
             VT   RIP +Q+  VDL   S G+T ER K V FS  +  +   +  A D  +    D
Sbjct: 88  --VTGPNRIPYLQSNQVDLLVASLGITEERAKNVDFSQPYAGISIGVFGAADLAVTKPED 145

Query: 149 LAGKNV-VTTAGTTNERFLKSYNAEHKTNMFVISAKDHGEAFKMLETGRAAAFYMDDALL 207
           LAGK + V  A T +    K    +     F     D   A + L +G+     + + + 
Sbjct: 146 LAGKTIGVARASTQDTATTKIAPQDANIQRF----DDDASAVQALLSGQVELIGVSNVVA 201

Query: 208 YGERAKAKDPHNWVVVGEEQSREIYSCMLRKDDPQFLAVVNETLGDLYRSGEINGIYQRW 267
               A A    N  +   + S+++    +RK   + L  VN  L  +   G++N I+++W
Sbjct: 202 AQIEAAAPGRFNQKL---QLSQQVQGIAVRKGSSEMLKFVNGFLDKVKADGQLNAIHEKW 258

Query: 268 FESPIP 273
             SP+P
Sbjct: 259 LGSPLP 264