Pairwise Alignments

Query, 239 a.a., 16S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 243 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  106 bits (265), Expect = 4e-28
 Identities = 79/224 (35%), Positives = 114/224 (50%), Gaps = 28/224 (12%)

Query: 23  QAHYISRVLRMGEGDAVQLFDGSG------LEFRGSLLEVGKKRVTVQLTESFSGQTESP 76
           Q HY+ RVLR+  GD   + DG G      L  R  L  VG   V             + 
Sbjct: 26  QRHYLQRVLRLKPGDRCAVIDGQGGLWTAELGDRDQLFPVGAVPVL----------PPAQ 75

Query: 77  LRIHLGQGLSRGERMDWAIQKATELGVSEITPIFSDRCEVRLKDERADKRLQHWRQVAIS 136
            R+ L Q L + +  D  I++ATELGV+ I P+ SDR +VR + ++ D+    WR++AI 
Sbjct: 76  PRLTLIQSLPK-QGFDEVIRQATELGVTTIQPVISDRSQVRPEAQKTDR----WRKIAIE 130

Query: 137 ACEQCGRSTVPVIHPPLLLVDWLKQTQADLKLVLHPVAEPMVS-----HAKPS--SLAFL 189
           A EQ  R  +P + P  L  + + Q  AD    +      + +      A+P+   LA  
Sbjct: 131 ASEQSERLYLPQLEPIRLWSEAIAQIPADSLRCICLARRSLPNLLPWLQAQPAWTDLAIA 190

Query: 190 IGPEGGLTDLEVDTAQAAGYHAARLGPRVLRTETAPVVALAVAQ 233
           IGPEGG +D E++ A A G+    LG  +LR  TAP+VAL++AQ
Sbjct: 191 IGPEGGWSDAEIEQAIAVGWTPVSLGSSILRAVTAPIVALSLAQ 234