Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  177 bits (450), Expect = 2e-49
 Identities = 104/291 (35%), Positives = 160/291 (54%), Gaps = 3/291 (1%)

Query: 5   RHLPSITALQCFEAATRHLSFTRAAEELNLTQSAVSKQVAQLEELLQHLLFRRVRRRLQM 64
           R LP + +L+ FEAA RHLSFTRAAEEL +TQ+AVS Q+  LEE L   LFRR  R L +
Sbjct: 3   RRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLL 62

Query: 65  TPAGDLYLVEVRKILTQVEMSTHYLRSYGGETEVLRVSTPYTFGARWLVPRLKGWRLRHP 124
           T  G  Y ++++ I + +  +T  L     E   L +S P +F  +WLVPRL  +  + P
Sbjct: 63  TEEGQSYFLDIKDIFSSLAEATDKLLE-RSEKGALTISLPPSFAIQWLVPRLADFNQQEP 121

Query: 125 QIHLDLCNEQEPDELLQGKADMAFYFGQGSRPGTESQKLFSEELVPVCAPESLPA-QPFT 183
            I + +      +  L    D+A Y+G+GS PG  + KL+ E L+P+C+P  L   +P  
Sbjct: 122 DIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPME 181

Query: 184 APTQLSNLVLLQNASRPQGWHDWFASQGYQTEHSYHGPRFDTFYMCIRAAQVGCGVALLP 243
             + L+   LL + SR + W  +    G    +  HGP F    M ++AA  G GVAL  
Sbjct: 182 KLSDLAYHTLLHDTSR-KDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVALGN 240

Query: 244 RFLVEEELADGKLVIPWQHAMPSEDAYYLAYPEHSAEVPKVREFVKWMMEQ 294
             L + E+  G+L+ P+   + + +A+Y+   E  A++ ++  F  WM+++
Sbjct: 241 NVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKK 291