Pairwise Alignments

Query, 626 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

Subject, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  365 bits (936), Expect = e-105
 Identities = 192/393 (48%), Positives = 265/393 (67%), Gaps = 3/393 (0%)

Query: 1   MSFASLGLSEALVRAIEAAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
           ++F+ LGL   L+  +   G   PTP+QQ+AIP VLQG+D++  AQTGTGKT  F LP++
Sbjct: 6   ITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65

Query: 61  ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGMN 120
           +R        ++     ++ R LVL PTRELA QV DS + YA+  +     ++GG  M 
Sbjct: 66  QRFIEQPWQREANS---KEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMK 122

Query: 121 PQVQAMSRGVDVLVACPGRLLDLCGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR 180
            Q+  +  GVD+L+A PGRLLD     S+ L  VE+LVLDEADRMLDMGF+ D+++VL R
Sbjct: 123 VQLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRR 182

Query: 181 LPAKRQNLLFSATFSQDITALAGKLLHNPERIEVTPPNTTVERIEQRVFRLAASHKRALL 240
           L   RQ L FSATF   I A+A +++ +P  ++VTP N+T E ++Q V+ +    KR LL
Sbjct: 183 LSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELL 242

Query: 241 AHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLTAVAIHGNKSQNARTKALADFKAGSV 300
           ++LI +  W+QVLVFT+T+ G++ LAE L   G+ AV+I+G+KSQ AR KAL DFKAG V
Sbjct: 243 SYLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKV 302

Query: 301 RILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKL 360
           R L+ATD+AARGLDI QL  VVN+++P   EDYVHRIGRTGRAG +G A+SL++ DE+  
Sbjct: 303 RALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQ 362

Query: 361 LKSIERMTKQKIADGDLMGFDASAVEAEKPEAR 393
           L++IER+   ++    L GF+ S V  E+   R
Sbjct: 363 LEAIERLLNTRLPQEWLKGFEPSPVVHEENSPR 395