Pairwise Alignments

Query, 263 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 245 a.a., bacterial extracellular solute-binding protein, family 3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 65.9 bits (159), Expect = 8e-16
 Identities = 61/215 (28%), Positives = 88/215 (40%), Gaps = 12/215 (5%)

Query: 13  FTCLSLAAYGEKLRIVTEPWAPYVYDDN---------GTMRGLDYETTAIVFQRLGVEVQ 63
           F CL LA        V  P   Y YD++         G   G++ +    +  RLG EV 
Sbjct: 4   FVCLLLAIVFSSSAAVARPVIKYGYDEDYPPWEKNVSGKPVGINIDIMNALADRLGFEVV 63

Query: 64  WQFLPWKRCLAMLDQGQADGALDIFHSHERDALLLYPSEPLSDVEFVLFYANERPHPVQG 123
           ++  P+KR L +L+ G+ D    +  S ER+A   Y          V     E    ++ 
Sbjct: 64  YRPYPFKRVLVLLESGEIDMTGGLARSAEREAYARYLEPSYQKTIRVFIIRRESGIRLRT 123

Query: 124 LEDLRGLTVGTSPG-YLYGADFSDSALFNHEPAPSHEANFGKLMLGRIDLVITDRRVGQH 182
             DL  L +G   G  LY    SD  L   E A S +  F  L+ GR D+++      +H
Sbjct: 124 YADLIPLRIGVRAGNRLYEPFDSDPRLMKVE-AHSVDQLFQMLLAGRTDVIVGGSIQLRH 182

Query: 183 VIKALGLEGKVSQAPAVVSRQQ-QFLAVRRGAGMD 216
             K  G   KV  AP  V  Q   F A+ R + ++
Sbjct: 183 AAKVSGYASKVKLAPYTVETQDGGFFALSRASALE 217