Pairwise Alignments

Query, 295 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 293 a.a., Putative transport from Pseudomonas fluorescens FW300-N2E2

 Score =  503 bits (1296), Expect = e-147
 Identities = 253/286 (88%), Positives = 270/286 (94%), Gaps = 1/286 (0%)

Query: 1   MTTDEAGKTPNLSQEEQHDVDKNQPPRAAVLHEIIRTQGDQELERSVAALWWSALAAGLT 60
           M T + GKTP+LS +EQH+VD+NQPPRAAVLHEIIRTQG+QELERS+AALWWSALAAGLT
Sbjct: 1   MDTHKDGKTPDLSAQEQHEVDRNQPPRAAVLHEIIRTQGNQELERSIAALWWSALAAGLT 60

Query: 61  MGLSLMAMGLLNSRLPEGEAFKVIASFGYCAGFLAVILARQQLFTENTLTAVLPVMSKPT 120
           MGLSLMAMGLLNSRLP+ E FKVIASFGYCAGFLAVILARQQLFTENTLTAVLP+MSKPT
Sbjct: 61  MGLSLMAMGLLNSRLPDHEGFKVIASFGYCAGFLAVILARQQLFTENTLTAVLPIMSKPT 120

Query: 121 LGNAGRLLRLWTVVLVGNLCGTLLVAYVMLHLPIFDTKTDLAFLEIGRKIMENDAGQMFA 180
           LGN GRLLRLW VVLVGNLCGTLLVAYVMLHLPIFD +TD AFLEIGRK+MEND GQMFA
Sbjct: 121 LGNFGRLLRLWGVVLVGNLCGTLLVAYVMLHLPIFDPRTDQAFLEIGRKVMENDTGQMFA 180

Query: 181 KGIISGWMIATMVWMIPSMESAKMFIIILITYLMALGDFTHIVVGSAEVSYLVFAGELAW 240
           KGIISGWMIATMVWMIPSMESAKM+II LITYLMALGDFTHIVVGSAEVSYLVFAG+L+W
Sbjct: 181 KGIISGWMIATMVWMIPSMESAKMWIITLITYLMALGDFTHIVVGSAEVSYLVFAGQLSW 240

Query: 241 KDFWLVFAGPTLAGNIIGGSFIFALISHAQIRSEGSLP-DKKAADP 285
           +DFW+VFAGPTLAGNIIGGSFIFALISHAQIRSE  LP DK AA+P
Sbjct: 241 EDFWMVFAGPTLAGNIIGGSFIFALISHAQIRSEVGLPKDKGAAEP 286