Pairwise Alignments

Query, 295 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 274 a.a., formate/nitrite transporter family protein from Methanococcus maripaludis S2

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 26/207 (12%)

Query: 82  KVIASFGYCAGFLAVILARQQLFTENTLTAVLPVMSKPTLGNAGRLLRLWTVVLVGNLCG 141
           K +A+  +  G + +IL   +L T + +  +LPV       +  +L+++W  V +GNL G
Sbjct: 63  KFMAAAVFPVGLILIILTGMELVTGDMM--LLPVAVFQRKASYAQLIKVWIYVYIGNLIG 120

Query: 142 TLLVAYVMLHLPI--FDTKT-DLAFLEIGRKIMEN---------DAGQM-----FAKGII 184
           +L+ A +M   P+  FD+ T + A    G+  +            AG M       KGI 
Sbjct: 121 SLIYASMMAFGPLRSFDSATGEAAVNAFGQSAINTAQAKVLPYMAAGSMGWLAALVKGIG 180

Query: 185 SGWMIATMVWMIPSMES----AKMFIIILITYLMALGDFTHIVVGSAEV-SYLVFAGELA 239
             W++   V  I SM S     K F+I           F H V     + + ++    ++
Sbjct: 181 CNWLVNLAV--IGSMASTSILGKFFMIWFPIMAFVATGFEHCVANMYFIPTGMMLGATVS 238

Query: 240 WKDFWLVFAGPTLAGNIIGGSFIFALI 266
             D+WL    P   GNIIG     A+I
Sbjct: 239 VADWWLWNIIPVTIGNIIGAVVFVAMI 265